RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 C12orf57Q99622 126 aa12.73□□□□□ -0.37
USP49-203ENST00000394253 SLC2A11Q9BYW1 496 aa12.73□□□□□ -0.37
USP49-203ENST00000394253 OR8D2Q9GZM6 311 aa12.73□□□□□ -0.37
USP49-203ENST00000394253 PSAT1Q9Y617 370 aa12.73□□□□□ -0.37
USP49-203ENST00000394253 A8MT66 165 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 CXCL11O14625 94 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 RNH1P13489 461 aaKnown RBP12.72□□□□□ -0.37
USP49-203ENST00000394253 SLC22A6Q4U2R8 563 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 FBXW12Q6X9E4 464 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 NIPA2Q8N8Q9 360 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 OR5M8Q8NGP6 311 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 RAB18Q9NP72 206 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 FKBPLQ9UIM3 349 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 SYN3O14994 580 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 HPNP05981 417 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 CBR1P16152 277 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 ZNF8P17098 575 aaPredicted RBP12.72□□□□□ -0.37
USP49-203ENST00000394253 TBPP20226 339 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 DUSP6Q16828 381 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 RBM23Q86U06 439 aaKnown RBP12.72□□□□□ -0.37
USP49-203ENST00000394253 DCLRE1CQ96SD1 692 aaKnown RBP12.72□□□□□ -0.37
USP49-203ENST00000394253 FREM3P0C091 2139 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 HAS3O00219 553 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 CLIC3O95833 236 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 OR10J4P0C629 311 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 SMIM10L2AP0DMW4 78 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 SMIM10L2BP0DMW5 78 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 EPHA4P54764 986 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 CLDN6P56747 220 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 UBXN2BQ14CS0 331 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 OR5D16Q8NGK9 328 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 OR10Z1Q8NGY1 313 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 NKX3-1Q99801 234 aaPredicted RBP12.72□□□□□ -0.37
USP49-203ENST00000394253 OR10A5Q9H207 317 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 OR10A2Q9H208 303 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 ENPP5Q9UJA9 477 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 HEATR5AQ86XA9 2040 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 MANSC4A6NHS7 340 aaPredicted RBP12.72□□□□□ -0.37
USP49-203ENST00000394253 HNRNPA2B1P22626 353 aaKnown RBP12.72□□□□□ -0.37
USP49-203ENST00000394253 CDK5Q00535 292 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 PAQR3Q6TCH7 311 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 SLC24A4Q8NFF2 622 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 OR2T11Q8NH01 316 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 DAZLQ92904 295 aaKnown RBP12.72□□□□□ -0.37
USP49-203ENST00000394253 RAB3CQ96E17 227 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 ZNF382Q96SR6 550 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 PBX4Q9BYU1 374 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 ACKR4Q9NPB9 350 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 VSX1Q9NZR4 365 aaPredicted RBP12.72□□□□□ -0.37
USP49-203ENST00000394253 DNAJB11Q9UBS4 358 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 ABCC3O15438 1527 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 A0A0B4J2A0 478 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 LOC102725191A0A1B0GVB3 256 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 SLC15A5A6NIM6 579 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 MAMDC2Q7Z304 686 aaPredicted RBP12.72□□□□□ -0.37
USP49-203ENST00000394253 RELTQ969Z4 430 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 NTN4Q9HB63 628 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 CLCF1Q9UBD9 225 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 SHPKQ9UHJ6 478 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 TNFRSF10AO00220 468 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 GPR39O43194 453 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 G0S2P27469 103 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 HTR1EP28566 365 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 GOLGA7Q7Z5G4 137 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 ADGRG3Q86Y34 549 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 CERS5Q8N5B7 392 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 DHRS9Q9BPW9 319 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 CD244Q9BZW8 370 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 NOX3Q9HBY0 568 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 GPR83Q9NYM4 423 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 STEAP1Q9UHE8 339 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 STXBP5LQ9Y2K9 1186 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 URGCP-MRPS24S4R325 110 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 A8MUA0 341 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 STSP08842 583 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 DAP3P51398 398 aaKnown RBP12.72□□□□□ -0.37
USP49-203ENST00000394253 FAM217AQ8IXS0 508 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 KCNH6Q9H252 994 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 SPHK1Q9NYA1 384 aa12.72□□□□□ -0.37
USP49-203ENST00000394253 PDHXO00330 501 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 HRH2P25021 359 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 LPCAT3Q6P1A2 487 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 OR52E2Q8NGJ4 325 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 YIPF5Q969M3 257 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 SEZ6LQ9BYH1 1024 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 LHPPQ9H008 270 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 MMP7P09237 267 aaPredicted RBP12.71□□□□□ -0.37
USP49-203ENST00000394253 SPI1P17947 270 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 FOXN2P32314 431 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 SNU13P55769 128 aaKnown RBP12.71□□□□□ -0.37
USP49-203ENST00000394253 SLC35A2P78381 396 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 BLOC1S3Q6QNY0 202 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 GKN2Q86XP6 184 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 REM2Q8IYK8 340 aaPredicted RBP12.71□□□□□ -0.37
USP49-203ENST00000394253 KIAA1191Q96A73 305 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 SMIM3Q9BZL3 60 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 INPP5EQ9NRR6 644 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 PIGVQ9NUD9 493 aa12.71□□□□□ -0.37
USP49-203ENST00000394253 LILRB3O75022 631 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms