RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 OR5B2Q96R09 309 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 FUZQ9BT04 418 aa15.53■□□□□ 0.08
SCN3B-202ENST00000392770 GJE1A6NN92 205 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 PLRG1O43660 514 aaKnown RBP15.52■□□□□ 0.08
SCN3B-202ENST00000392770 CDK1P06493 297 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 PTRH1Q86Y79 214 aaKnown RBP15.52■□□□□ 0.08
SCN3B-202ENST00000392770 SLC37A3Q8NCC5 494 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 TNFRSF12AQ9NP84 129 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 FANCFQ9NPI8 374 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 POLR2AP24928 1970 aaKnown RBP15.52■□□□□ 0.08
SCN3B-202ENST00000392770 C7orf72A4D263 438 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 C12orf71A8MTZ7 269 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 SCRG1O75711 98 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 GASTP01350 101 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 ARHGDIBP52566 201 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 MCCD1P59942 119 aaPredicted RBP15.52■□□□□ 0.08
SCN3B-202ENST00000392770 RACK1P63244 317 aaKnown RBP15.52■□□□□ 0.08
SCN3B-202ENST00000392770 TP53I3Q53FA7 332 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 BCL2L15Q5TBC7 163 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 PITX2Q99697 317 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 UBE2ZQ9H832 354 aaPredicted RBP15.52■□□□□ 0.08
SCN3B-202ENST00000392770 C2orf42Q9NWW7 574 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 OR6C70A6NIJ9 312 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 B3GALT4O96024 378 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 SLC48A1Q6P1K1 146 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 LRRN1Q6UXK5 716 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 FRMD6Q96NE9 622 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 MAP3K3Q99759 626 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 EVA1AQ9H8M9 152 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 SLC39A1Q9NY26 324 aa15.52■□□□□ 0.08
SCN3B-202ENST00000392770 DISC1C4P0D8 188 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 TNFRSF10CO14798 259 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 OR7A5Q15622 319 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 ZNF613Q6PF04 617 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 CYHR1Q6ZMK1 362 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 ZNF100Q8IYN0 542 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 GPR137CQ8N3F9 429 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 OR5AK2Q8NH90 309 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 TMEM163Q8TC26 289 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 NEURL3Q96EH8 262 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 C1QTNF3Q9BXJ4 246 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 OR52D1Q9H346 318 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 ATG4BQ9Y4P1 393 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 FAM227AF5H4B4 570 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 ERVK-25P63136 954 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 TMEM69Q5SWH9 247 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 PRAMEF8Q5VWM4 474 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 PRAMEF7Q5VXH5 474 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 WBP2NLQ6ICG8 309 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 OR5W2Q8NH69 310 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 SPRYD4Q8WW59 207 aaPredicted RBP15.52■□□□□ 0.07
SCN3B-202ENST00000392770 PPP1R14BQ96C90 147 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 SCGB3A2Q96PL1 93 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 FOLH1BQ9HBA9 442 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 UBQLN4Q9NRR5 601 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 TESQ9UGI8 421 aaKnown RBP15.52■□□□□ 0.07
SCN3B-202ENST00000392770 MEMO1Q9Y316 297 aa15.52■□□□□ 0.07
SCN3B-202ENST00000392770 CSF2P04141 144 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 ZNF43P17038 809 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 PRKCDQ05655 676 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 EIF2B1Q14232 305 aaKnown RBP15.51■□□□□ 0.07
SCN3B-202ENST00000392770 SWI5Q1ZZU3 235 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 NT5DC2Q9H857 520 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 PPP2CBP62714 309 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 PPP2CAP67775 309 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 FAM160A2Q8N612 972 aaPredicted RBP15.51■□□□□ 0.07
SCN3B-202ENST00000392770 EGLN3Q9H6Z9 239 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 ENPP5Q9UJA9 477 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 ZNF195O14628 629 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 SMAD9O15198 467 aaKnown RBP15.51■□□□□ 0.07
SCN3B-202ENST00000392770 KCNJ10P78508 379 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 Q8N402 240 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 OR14A16Q8NHC5 309 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 OR6C1Q96RD1 312 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 LMF2Q9BU23 707 aaKnown RBP15.51■□□□□ 0.07
SCN3B-202ENST00000392770 TRAV6A0A075B6T7 132 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 LRIT2A6NDA9 550 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 POM121BA6NF01 834 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 STOMP27105 288 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 HSD11B2P80365 405 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 ZNF683Q8IZ20 524 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 PMM1Q92871 262 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 ERVK13-1Q9NX77 482 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 PFDN2Q9UHV9 154 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 ACPPP15309 386 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 FRKP42685 505 aaPredicted RBP15.51■□□□□ 0.07
SCN3B-202ENST00000392770 RPS5P46782 204 aaKnown RBP15.51■□□□□ 0.07
SCN3B-202ENST00000392770 DAP3P51398 398 aaKnown RBP15.51■□□□□ 0.07
SCN3B-202ENST00000392770 LIM2P55344 173 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 HTRA4P83105 476 aaPredicted RBP15.51■□□□□ 0.07
SCN3B-202ENST00000392770 LSAMPQ13449 338 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 SMAD4Q13485 552 aaKnown RBP15.51■□□□□ 0.07
SCN3B-202ENST00000392770 LEXMQ3ZCV2 418 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 ABHD17BQ5VST6 288 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 TMED4Q7Z7H5 227 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 OR4K3Q96R72 315 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 ACOT13Q9NPJ3 140 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 C1GALT1Q9NS00 363 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 ICKQ9UPZ9 632 aa15.51■□□□□ 0.07
SCN3B-202ENST00000392770 ZNF337Q9Y3M9 751 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms