RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 MSRB3Q8IXL7 192 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 PM20D2Q8IYS1 436 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 ANKFN1Q8N957 763 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 B4GALNT2Q8NHY0 566 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 C1GALT1C1Q96EU7 318 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 SFXN2Q96NB2 322 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 SAP130Q9H0E3 1048 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 VAPAQ9P0L0 249 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 SLAMF8Q9P0V8 285 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 SLC6A5Q9Y345 797 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 GMEB1Q9Y692 573 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 HIVEP3Q5T1R4 2406 aa13.66□□□□□ -0.22
IGHV3-53-201ENST00000390627 A0A087WZY1 265 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 TRBV5-3A0A0A0MS03 114 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 PRAMEF27A3QJZ7 478 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 SERINC4A6NH21 518 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 E9PLN8 166 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 GTPBP1O00178 669 aaKnown RBP13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 GMFGO60234 142 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 SNX3O60493 162 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 WDR1O75083 606 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 TNFRSF21O75509 655 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 CHRM4P08173 479 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 UBL4AP11441 157 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 BMP2P12643 396 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 GABRA1P14867 456 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 CRISP3P54108 245 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 SUMO3P55854 103 aaPredicted RBP13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 CHRNEQ04844 493 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 SYPL1Q16563 259 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 MMEL1Q495T6 779 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 GXYLT1Q4G148 440 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 COQ5Q5HYK3 327 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 RAET1LQ5VY80 246 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 VASNQ6EMK4 673 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 ENPP6Q6UWR7 440 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 DLEU7Q6UYE1 221 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 OLIG3Q7RTU3 272 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 RETREG3Q86VR2 466 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 OR5M9Q8NGP3 310 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 SSC4DQ8WTU2 575 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 PMM1Q92871 262 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 ABTB1Q969K4 478 aaPredicted RBP13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 SH3YL1Q96HL8 342 aaPredicted RBP13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 VKORC1Q9BQB6 163 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 SLC38A1Q9H2H9 487 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 PNPLA3Q9NST1 481 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 TNFRSF10DQ9UBN6 386 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 RPH3AQ9Y2J0 694 aaPredicted RBP13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 MEMO1Q9Y316 297 aa13.65□□□□□ -0.22
IGHV3-53-201ENST00000390627 FREM3P0C091 2139 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 MYO18BQ8IUG5 2567 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 LINC01387J3KSC0 135 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZNF264O43296 627 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZIC3O60481 467 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 EIF4E2O60573 245 aaKnown RBP13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 BCHEP06276 602 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 HOXD4P09016 255 aaPredicted RBP13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 BMP7P18075 431 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 CHMP24386 653 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 PTGER4P35408 488 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 ADH7P40394 386 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 P2RX1P51575 399 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZNF41P51814 821 aaPredicted RBP13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 GFRA1P56159 465 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZNF117Q03924 483 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 GLYR1Q49A26 553 aaPredicted RBP13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 GCNT6Q5T4J0 391 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZNF585AQ6P3V2 769 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 EIF3MQ7L2H7 374 aaKnown RBP13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 SNX32Q86XE0 403 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 TOR1AIP2Q8NFQ8 470 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 PHF10Q8WUB8 498 aaKnown RBP13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 TMEM19Q96HH6 336 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 CGREF1Q99674 301 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 TIMP4Q99727 224 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 PIGQQ9BRB3 760 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 CPPED1Q9BRF8 314 aaPredicted RBP13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 UGT2B28Q9BY64 529 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 PRDM14Q9GZV8 571 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 MTHFD2LQ9H903 347 aaPredicted RBP13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 CACYBPQ9HB71 228 aaKnown RBP13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 A4GALTQ9NPC4 353 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 ARMCX1Q9P291 453 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 VDAC3Q9Y277 283 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 SLC35A3Q9Y2D2 325 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 CARD8Q9Y2G2 431 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 L3MBTL1Q9Y468 752 aa13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 UBR5O95071 2799 aaPredicted RBP13.64□□□□□ -0.23
IGHV3-53-201ENST00000390627 CENPVL1A0A0U1RR11 272 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 NUDT14O95848 222 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 CSTAP01040 98 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 LDLRP01130 860 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 TFPTP0C1Z6 253 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZNF17P17021 662 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 GPX2P18283 190 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 TCEA1P23193 301 aaKnown RBP13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 ACVR2AP27037 513 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 RNF144AP50876 292 aaPredicted RBP13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 CYLC2Q14093 348 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 1326.9 ms