RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 CNIH3Q8TBE1 160 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 VN1R17PQ8TDU5 208 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 SHC3Q92529 594 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 RAB3CQ96E17 227 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 PPP1R16AQ96I34 528 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 TGM7Q96PF1 710 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 PSKH2Q96QS6 385 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 OR5B2Q96R09 309 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 RIT2Q99578 217 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 CITED1Q99966 193 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 SOSTQ9BQB4 213 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 TMEM121Q9BTD3 319 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 PPDPFQ9H3Y8 114 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 NANSQ9NR45 359 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 NUDT15Q9NV35 164 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 SMPD3Q9NY59 655 aaPredicted RBP2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 PIPOXQ9P0Z9 390 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 LCMT1Q9UIC8 334 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 ZNF221Q9UK13 617 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 OARD1Q9Y530 152 aa2.33□□□□□ -2.04
TRAJ40-201ENST00000390497 TRAV26-1A0A087WT03 109 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 IGHV2-70DA0A0C4DH43 119 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 ZSCAN5BA6NJL1 495 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 A8MX80 341 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 SHISA9B4DS77 424 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 E7ESA3 106 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 E9PLD3 99 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 SURF6O75683 361 aaKnown RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 NEBLO76041 1014 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 SNX4O95219 450 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 LRATO95237 230 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 HPP00738 406 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 CAPN1P07384 714 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 CD55P08174 381 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 ZNF883P0CG24 379 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 PNMTP11086 282 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 CALB2P22676 271 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 PAX7P23759 505 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 SHC1P29353 583 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 NMT1P30419 496 aaKnown RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 NF2P35240 595 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 XCR1P46094 333 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 TDO2P48775 406 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 RPL32P62910 135 aaKnown RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 VLDLRP98155 873 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 MAP2K1Q02750 393 aaPredicted RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 RAB40BQ12829 278 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 ZNF154Q13106 437 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 MXD4Q14582 209 aaPredicted RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 CHI3L2Q15782 390 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 RABL6Q3YEC7 729 aaPredicted RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 C14orf177Q52M58 125 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 BEND3Q5T5X7 828 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 ATF7IP2Q5U623 682 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 LEMD1Q68G75 181 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 PMF1Q6P1K2 205 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 C2orf66Q6UXQ4 117 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 Q6ZPB1 254 aaPredicted RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 RUFY3Q7L099 469 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 TIPARPQ7Z3E1 657 aaKnown RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 SLC47A2Q86VL8 602 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 SLC38A6Q8IZM9 456 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 MTURNQ8N3F0 131 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 CADM2Q8N3J6 435 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 DHRSXQ8N5I4 330 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 STXBP6Q8NFX7 210 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 OR4D5Q8NGN0 318 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 OR9A4Q8NGU2 314 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 OR4Q3Q8NH05 313 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 OR2L2Q8NH16 312 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 TCTEX1D2Q8WW35 142 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 FAM3CQ92520 227 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 MRPS31Q92665 395 aaKnown RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 EFHD2Q96C19 240 aaPredicted RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 COQ2Q96H96 371 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 TMEM80Q96HE8 168 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 TPD52L3Q96J77 140 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 C12orf66Q96MD2 445 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 AMDHD1Q96NU7 426 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 RBM14Q96PK6 669 aaKnown RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 OR5M11Q96RB7 305 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 APOL2Q9BQE5 337 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 TMEM43Q9BTV4 400 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 PUS3Q9BZE2 481 aaKnown RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 PKIBQ9C010 78 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 GLT8D2Q9H1C3 349 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 ZNF385DQ9H6B1 395 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 MEAF6Q9HAF1 191 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 MEPEQ9NQ76 525 aaPredicted RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 CLEC5AQ9NY25 188 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 WRAP73Q9P2S5 460 aaPredicted RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 PRODH2Q9UF12 536 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 RRP15Q9Y3B9 282 aaKnown RBP2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 L3MBTL1Q9Y468 752 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 ANKRD30BQ9BXX2 1392 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 MYH15Q9Y2K3 1946 aa2.32□□□□□ -2.04
TRAJ40-201ENST00000390497 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.31□□□□□ -2.04
TRAJ40-201ENST00000390497 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.31□□□□□ -2.04
TRAJ40-201ENST00000390497 METTL21EPA6NDL7 271 aa2.31□□□□□ -2.04
TRAJ40-201ENST00000390497 UBXN8O00124 270 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms