RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 A4GNTQ9UNA3 340 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 EDARQ9UNE0 448 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 A0A1W2PRQ8 180 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 H3BNC9 293 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 GSTZ1O43708 216 aaPredicted RBP13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 IGHA1P01876 353 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 CXCL10P02778 98 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 C8GP07360 202 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 IFNGR1P15260 489 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 HMGA1P17096 107 aaKnown RBP13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 HSD3B2P26439 372 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 MICBQ29980 383 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 SLC25A35Q3KQZ1 300 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 LYPLAL1Q5VWZ2 237 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 PXT1Q8NFP0 134 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 SKA2Q8WVK7 121 aaPredicted RBP13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 BRF2Q9HAW0 419 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 GSN-AS1Q9NRJ2 163 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 SSX5O60225 188 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 NDUFS6O75380 124 aaKnown RBP13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 RLN2P04090 185 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 IFNA4P05014 189 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 RHOCP08134 193 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 GKP32189 559 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 SOAT1P35610 550 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 HSD17B2P37059 387 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 SLC11A2P49281 568 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 CHRNA6Q15825 494 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 TMEM255AQ5JRV8 349 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 RNF219Q5W0B1 726 aaPredicted RBP13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 C1orf94Q6P1W5 598 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 NHLRC1Q6VVB1 395 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 GLDNQ6ZMI3 551 aaPredicted RBP13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 PRSS45Q7RTY3 260 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 NANPQ8TBE9 248 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 PIGKQ92643 395 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 BCL2L14Q9BZR8 327 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 ISG20L2Q9H9L3 353 aaKnown RBP13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 MED11Q9P086 117 aa13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 EXOGQ9Y2C4 368 aaKnown RBP13.7□□□□□ -0.22
VPS9D1-201ENST00000389386 E7EQ34 232 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 H0YIV9 168 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 GDNFP39905 211 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 CCR9P51686 369 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 TSC22D1Q15714 1073 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 SWI5Q1ZZU3 235 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 PRSS53Q2L4Q9 553 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 SLC25A25Q6KCM7 469 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 TSPAN33Q86UF1 283 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 IQCHQ86VS3 1027 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 SP7Q8TDD2 431 aaPredicted RBP13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 SFT2D1Q8WV19 159 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 ELP4Q96EB1 424 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 ZNF354BQ96LW1 612 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 GSDMCQ9BYG8 508 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 DENND4AQ7Z401 1863 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 C5orf58C9J3I9 102 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 KPNA3O00505 521 aaPredicted RBP13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 HYAL3O43820 417 aaPredicted RBP13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 IGF2P01344 180 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 BCHEP06276 602 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 ACAA1P09110 424 aaPredicted RBP13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 FURINP09958 794 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 RFC3P40938 356 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 ELAVL2Q12926 359 aaKnown RBP13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 FGL2Q14314 439 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 FAM69AQ5T7M9 428 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 AADACL4Q5VUY2 407 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 TMEM88Q6PEY1 159 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 DNAJB7Q7Z6W7 309 aaPredicted RBP13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 TPRA1Q86W33 373 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 MEX3DQ86XN8 651 aaKnown RBP13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 OR6V1Q8N148 313 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 NXPE1Q8N323 547 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 RELL2Q8NC24 303 aaPredicted RBP13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 SLC25A32Q9H2D1 315 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 SGK2Q9HBY8 427 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 MRPL15Q9P015 296 aaKnown RBP13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 KLHL42Q9P2K6 505 aa13.69□□□□□ -0.22
VPS9D1-201ENST00000389386 HELZP42694 1942 aaKnown RBP13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 ARPC1BO15143 372 aaKnown RBP13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 EIF3GO75821 320 aaKnown RBP eCLIP13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 AQP8O94778 261 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 RORAP35398 523 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 CCR8P51685 355 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 PDE7AQ13946 482 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 SLC8B1Q6J4K2 584 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 KIAA1161Q6NSJ0 714 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 DBX2Q6ZNG2 339 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 SLC9B2Q86UD5 537 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 VRK3Q8IV63 474 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 MEIOBQ8N635 442 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 MORN4Q8NDC4 146 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 SMIM4Q8WVI0 70 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 RFKQ969G6 155 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 PPCDCQ96CD2 204 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 TMEM19Q96HH6 336 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 AUNIPQ9H7T9 357 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 HRASLSQ9HDD0 168 aa13.68□□□□□ -0.22
VPS9D1-201ENST00000389386 MAN2C1Q9NTJ4 1040 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms