RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 FAM71E1Q6IPT2 247 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 LRRC25Q8N386 305 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 SDR9C7Q8NEX9 313 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 TCEAL4Q96EI5 215 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 SYT17Q9BSW7 474 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 ARID1AO14497 2285 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 TRAV18A0A075B6X5 111 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 ZNF705EA8MWA4 302 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 DBIP07108 87 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 TFPIP10646 304 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 GDNFP39905 211 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 VEGFCP49767 419 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 SEC13P55735 322 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 GFOD2Q3B7J2 385 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 LIPIQ6XZB0 460 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 MEPCEQ7L2J0 689 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 TMIEQ8NEW7 156 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 WFIKKN2Q8TEU8 576 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 TMEM239Q8WW34 195 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 TTC3P53804 2025 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 CLDN4O14493 209 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 PEX14O75381 377 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 ACRP10323 421 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 PVALBP20472 110 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 IL32P24001 234 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 ACTA2P62736 377 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 ACTG2P63267 376 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 FAM83HQ6ZRV2 1179 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 PRICKLE2Q7Z3G6 844 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 LRRC56Q8IYG6 542 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 PRSS58Q8IYP2 241 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 NEURL3Q96EH8 262 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 SGIP1Q9BQI5 828 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 CLSTN3Q9BQT9 956 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 ACTRT3Q9BYD9 372 aa12.33□□□□□ -0.44
TRAPPC9-201ENST00000389328 A0A0A6YYJ9 748 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 TIMP2P16035 220 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 EVX1P49640 407 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 TAGLNQ01995 201 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 RPL13AP3Q6NVV1 102 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 FAM122CQ6P4D5 195 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 ENPP7Q6UWV6 458 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 FAM26EQ8N5C1 309 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 GHSRQ92847 366 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 RBPMSQ93062 196 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 PKMYT1Q99640 499 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 DHRS9Q9BPW9 319 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 CWH43Q9H720 699 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 TMEM184CQ9NVA4 438 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 CLEC4EQ9ULY5 219 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 COL16A1Q07092 1604 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 CYB5AP00167 134 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 C1QCP02747 245 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 CPEP16870 476 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 SDHBP21912 280 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 PRLHRP49683 370 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 FCRLAQ7L513 359 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 GET4Q7L5D6 327 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 DCLRE1CQ96SD1 692 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 DDOQ99489 341 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 ATP13A2Q9NQ11 1180 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 SLC52A3Q9NQ40 469 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 SLC23A1Q9UHI7 598 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 TRAPPC4Q9Y296 219 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 OR1A2Q9Y585 309 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 PRAF2O60831 178 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 SC5DO75845 299 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 ZNF823P16415 610 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 GALK2Q01415 458 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 GK2Q14410 553 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 ALG10BQ5I7T1 473 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 GRASPQ7Z6J2 395 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 ATCAYQ86WG3 371 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 ADGRF3Q8IZF5 1079 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 ACOT4Q8N9L9 421 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 GSX2Q9BZM3 304 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 ZNF350Q9GZX5 532 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 MTIF3Q9H2K0 278 aaKnown RBP12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 TAAR2Q9P1P5 351 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 SLC6A14Q9UN76 642 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 NAALAD2Q9Y3Q0 740 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 PTPRFP10586 1907 aa12.32□□□□□ -0.44
TRAPPC9-201ENST00000389328 EDDM13A0A1B0GTR0 161 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 RGS13O14921 159 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 B4GALT2O60909 372 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 FGF19O95750 216 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 IGLV3-27P01718 113 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 PRH1P02810 166 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 CYBAP13498 195 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 PSMB1P20618 241 aaKnown RBP12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 WNT3P56703 355 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 TEKQ02763 1124 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 ZNF750Q32MQ0 723 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 C18orf63Q68DL7 685 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 ARHGAP11AQ6P4F7 1023 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 NLRP8Q86W28 1048 aa12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 CCDC71Q8IV32 467 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC9-201ENST00000389328 ADAMTS14Q8WXS8 1223 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms