RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 NR4A3Q92570 626 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 SLC9A6Q92581 669 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 NACC2Q96BF6 587 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 THAP7Q9BT49 309 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-202ENST00000381990 JAM3Q9BX67 310 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 DPAGT1Q9H3H5 408 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 KIR3DX1Q9H7L2 352 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 CA5BQ9Y2D0 317 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-202ENST00000381990 CCDC88CQ9P219 2028 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 XIRP2A4UGR9 3374 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 FEZF1A0PJY2 475 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 H0Y8X5 98 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 SCAMP1O15126 338 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 CASC3O15234 703 aaKnown RBP8.34□□□□□ -1.07
GPNMB-202ENST00000381990 OR1F1O43749 312 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 PRICKLE3O43900 615 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-202ENST00000381990 SNAPC5O75971 98 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 NDUFS1P28331 727 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 BSGP35613 385 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 PITPNBP48739 271 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 RAB14P61106 215 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 YPEL5P62699 121 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 CCDC85BQ15834 202 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-202ENST00000381990 BCL2L15Q5TBC7 163 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 FAAH2Q6GMR7 532 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 TNFAIP8L2Q6P589 184 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-202ENST00000381990 CHRDL2Q6WN34 429 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 TBC1D19Q8N5T2 526 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 ZNF655Q8N720 491 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-202ENST00000381990 MORN4Q8NDC4 146 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 TTLQ8NG68 377 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 LHFPL5Q8TAF8 219 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 HMGB4Q8WW32 186 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 CCDC120Q96HB5 630 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 PRRC1Q96M27 445 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 F2RL3Q96RI0 385 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 TREX2Q9BQ50 279 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-202ENST00000381990 PHF7Q9BWX1 381 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-202ENST00000381990 SORBS1Q9BX66 1292 aaKnown RBP8.34□□□□□ -1.07
GPNMB-202ENST00000381990 HEXA-AS1Q9H8Q6 139 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 LIN7BQ9HAP6 207 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 MED17Q9NVC6 651 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 USP36Q9P275 1121 aaKnown RBP8.34□□□□□ -1.07
GPNMB-202ENST00000381990 P2RX2Q9UBL9 471 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 TBC1D29Q9UFV1 150 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 UBQLN2Q9UHD9 624 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 FKBP7Q9Y680 259 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 CACNG2Q9Y698 323 aa8.34□□□□□ -1.07
GPNMB-202ENST00000381990 IGKV1-8A0A0C4DH67 115 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 FAM170BA6NMN3 283 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 HMGN4O00479 90 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 SLC28A2O43868 658 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 CLEC3AO75596 197 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 SEMA4FO95754 770 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 RRASP10301 218 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 NAGAP17050 411 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 ELK1P19419 428 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 CELP19835 753 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 AHCYP23526 432 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 PPP2R1BP30154 601 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 MANFP55145 182 aaKnown RBP8.33□□□□□ -1.08
GPNMB-202ENST00000381990 SRP54P61011 504 aaKnown RBP8.33□□□□□ -1.08
GPNMB-202ENST00000381990 SHC2P98077 582 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 MADCAM1Q13477 382 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 PIN1Q13526 163 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-202ENST00000381990 TMEM31Q5JXX7 168 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 RD3Q7Z3Z2 195 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 ADCK2Q7Z695 626 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 ABI3BPQ7Z7G0 1075 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 OAFQ86UD1 273 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 IQCHQ86VS3 1027 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 ADGRG3Q86Y34 549 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 TOR1AIP2Q8NFQ8 470 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 RGMAQ96B86 450 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 ZNF764Q96H86 408 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-202ENST00000381990 TMED9Q9BVK6 235 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 RNF32Q9H0A6 362 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 TBC1D17Q9HA65 648 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 MRPS30Q9NP92 439 aaKnown RBP8.33□□□□□ -1.08
GPNMB-202ENST00000381990 ZNF275Q9NSD4 429 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-202ENST00000381990 EMC3Q9P0I2 261 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 ZNF222Q9UK12 451 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 PCOLCE2Q9UKZ9 415 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 LIPT1Q9Y234 373 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 C10orf142B7Z368 130 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 NDUFS4O43181 175 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 LCMT2O60294 686 aaKnown RBP8.33□□□□□ -1.08
GPNMB-202ENST00000381990 UBXN7O94888 489 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 IGHA1P01876 353 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 C4BPBP20851 252 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 EPHA4P54764 986 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 CDH11P55287 796 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 NTRK2Q16620 822 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 COL13A1Q5TAT6 717 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-202ENST00000381990 C6orf120Q7Z4R8 191 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 FGD2Q7Z6J4 655 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 COMMD7Q86VX2 200 aa8.33□□□□□ -1.08
GPNMB-202ENST00000381990 RBM45Q8IUH3 476 aaKnown RBP8.33□□□□□ -1.08
GPNMB-202ENST00000381990 TIGD4Q8IY51 512 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms