RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 SH3BP4Q9P0V3 963 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 PSMC3IPQ9P2W1 217 aaPredicted RBP20.63■□□□□ 0.89
U2AF1-202ENST00000380276 DCDC2Q9UHG0 476 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 FIS1Q9Y3D6 152 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 HIVEP2P31629 2446 aa20.63■□□□□ 0.89
U2AF1-202ENST00000380276 RNF223E7ERA6 249 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 TMCC2O75069 709 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 IL32P24001 234 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 CARD18P57730 90 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 ZNF844Q08AG5 666 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 ZYG11AQ6WRX3 759 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 FRMD7Q6ZUT3 714 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 ZAR1Q86SH2 424 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 LILRA2Q8N149 483 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 COX18Q8N8Q8 333 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 B4GALNT2Q8NHY0 566 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 ZBED6CLQ96FA7 236 aaPredicted RBP20.62■□□□□ 0.89
U2AF1-202ENST00000380276 TRMT61AQ96FX7 289 aaKnown RBP20.62■□□□□ 0.89
U2AF1-202ENST00000380276 MS4A4EQ96PG1 132 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 TMEM204Q9BSN7 226 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 LRTM1Q9HBL6 345 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 RNF115Q9Y4L5 304 aa20.62■□□□□ 0.89
U2AF1-202ENST00000380276 H3BQF6 201 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 ADAMDEC1O15204 470 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 RIPK2O43353 540 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 GLRA3O75311 464 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 KCNK2O95069 426 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 NTN1O95631 604 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 NUDT14O95848 222 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 IFI6P09912 130 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 ALOX5P09917 674 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 PSMB1P20618 241 aaKnown RBP20.61■□□□□ 0.89
U2AF1-202ENST00000380276 DMTNQ08495 405 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 DUSP5Q16690 384 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 ZNF385BQ569K4 471 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 CCNJQ5T5M9 372 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 CLEC6AQ6EIG7 209 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 TRMT10CQ7L0Y3 403 aaKnown RBP20.61■□□□□ 0.89
U2AF1-202ENST00000380276 SLC16A11Q8NCK7 471 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 OR6Y1Q8NGX8 325 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 CLHC1Q8NHS4 586 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 ABHD3Q8WU67 409 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 TSSK3Q96PN8 268 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 FBXO34Q9NWN3 711 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 EMCNQ9ULC0 261 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 PTGDR2Q9Y5Y4 395 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 JMJD1CQ15652 2540 aa20.61■□□□□ 0.89
U2AF1-202ENST00000380276 G3V2L1 256 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 SLC28A1O00337 649 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 RGS14O43566 566 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 CRLF1O75462 422 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 CD3EP07766 207 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 PABPC4LP0CB38 370 aaKnown RBP20.6■□□□□ 0.89
U2AF1-202ENST00000380276 UROSP10746 265 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 EFNA1P20827 205 aaPredicted RBP20.6■□□□□ 0.89
U2AF1-202ENST00000380276 PRIM2P49643 509 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 RNF144AP50876 292 aaPredicted RBP20.6■□□□□ 0.89
U2AF1-202ENST00000380276 FOXF1Q12946 379 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 MISPQ8IVT2 679 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 ATP6V1C2Q8NEY4 427 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 POC1BQ8TC44 478 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 ACTRT2Q8TDY3 377 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 FBXW5Q969U6 566 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 KLHDC3Q9BQ90 382 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 OR10A4Q9H209 315 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 REEP4Q9H6H4 257 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 TNFRSF12AQ9NP84 129 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 TIGARQ9NQ88 270 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 UBQLN4Q9NRR5 601 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 C1orf109Q9NX04 203 aa20.6■□□□□ 0.89
U2AF1-202ENST00000380276 C7orf72A4D263 438 aa20.59■□□□□ 0.89
U2AF1-202ENST00000380276 TP53P04637 393 aaPredicted RBP20.59■□□□□ 0.89
U2AF1-202ENST00000380276 NGFRP08138 427 aa20.59■□□□□ 0.89
U2AF1-202ENST00000380276 PSMA4P25789 261 aaKnown RBP20.59■□□□□ 0.89
U2AF1-202ENST00000380276 CDKN1AP38936 164 aa20.59■□□□□ 0.89
U2AF1-202ENST00000380276 NAA20P61599 178 aa20.59■□□□□ 0.89
U2AF1-202ENST00000380276 ZNF239Q16600 458 aaKnown RBP20.59■□□□□ 0.89
U2AF1-202ENST00000380276 NUFIP2Q7Z417 695 aaKnown RBP20.59■□□□□ 0.89
U2AF1-202ENST00000380276 TRABD2AQ86V40 505 aa20.59■□□□□ 0.89
U2AF1-202ENST00000380276 PHOSPHO1Q8TCT1 267 aa20.59■□□□□ 0.89
U2AF1-202ENST00000380276 C16orf58Q96GQ5 468 aa20.59■□□□□ 0.89
U2AF1-202ENST00000380276 ESRP2Q9H6T0 727 aaKnown RBP20.59■□□□□ 0.89
U2AF1-202ENST00000380276 NGBQ9NPG2 151 aa20.59■□□□□ 0.89
U2AF1-202ENST00000380276 GIN1Q9NXP7 522 aa20.59■□□□□ 0.89
U2AF1-202ENST00000380276 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.58■□□□□ 0.89
U2AF1-202ENST00000380276 A0A1W2PP18 115 aa20.58■□□□□ 0.89
U2AF1-202ENST00000380276 A0A1W2PPM1 405 aa20.58■□□□□ 0.89
U2AF1-202ENST00000380276 SHC1P29353 583 aa20.58■□□□□ 0.89
U2AF1-202ENST00000380276 MAP3K8P41279 467 aa20.58■□□□□ 0.89
U2AF1-202ENST00000380276 SERPINB4P48594 390 aa20.58■□□□□ 0.89
U2AF1-202ENST00000380276 RPL38P63173 70 aaKnown RBP20.58■□□□□ 0.89
U2AF1-202ENST00000380276 POU6F2P78424 691 aaPredicted RBP20.58■□□□□ 0.89
U2AF1-202ENST00000380276 FAPQ12884 760 aa20.58■□□□□ 0.89
U2AF1-202ENST00000380276 CD226Q15762 336 aa20.58■□□□□ 0.89
U2AF1-202ENST00000380276 TUSC5Q8IXB3 177 aa20.58■□□□□ 0.89
U2AF1-202ENST00000380276 BANPQ8N9N5 519 aa20.58■□□□□ 0.89
U2AF1-202ENST00000380276 NEUROG1Q92886 237 aa20.58■□□□□ 0.89
U2AF1-202ENST00000380276 KISS1RQ969F8 398 aaPredicted RBP20.58■□□□□ 0.89
U2AF1-202ENST00000380276 CPNE4Q96A23 557 aaPredicted RBP20.58■□□□□ 0.89
U2AF1-202ENST00000380276 GIMAP5Q96F15 307 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms