RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CFAP161Q6P656 301 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 TRIM40Q6P9F5 258 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 DLK2Q6UY11 383 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 SIAH3Q8IW03 269 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 EIF4E3Q8N5X7 224 aaKnown RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 DCBLD1Q8N8Z6 715 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 SLC24A4Q8NFF2 622 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 OR6K3Q8NGY3 331 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 PXYLP1Q8TE99 480 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 SDHCQ99643 169 aaPredicted RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 SLITRK2Q9H156 845 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 ATG5Q9H1Y0 275 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 OR52A5Q9H2C5 316 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 LRTM1Q9HBL6 345 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 ZNF726A6NNF4 738 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 MGMTP16455 207 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 TYMPP19971 482 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 CXCR3P49682 368 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 IL10RBQ08334 325 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 ZNF528Q3MIS6 628 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 C3orf38Q5JPI3 329 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 SDHAF4Q5VUM1 108 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 DEGS2Q6QHC5 323 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 SLC22A25Q6T423 547 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 SYT14Q8NB59 555 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 PROKR2Q8NFJ6 384 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 PHYHIPQ92561 330 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 TMEM169Q96HH4 297 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 IPPKQ9H8X2 491 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 FN3KRPQ9HA64 309 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 MAN2C1Q9NTJ4 1040 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 FKBPLQ9UIM3 349 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 CORO2BQ9UQ03 480 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 DNAJC15Q9Y5T4 150 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 PTGDR2Q9Y5Y4 395 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 IGKV6-21A0A0C4DH24 114 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 MOXD2PA6NHM9 499 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 UBE2CO00762 179 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 ERCC1P07992 297 aaPredicted RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 PPIBP23284 216 aaKnown RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 RBMS1P29558 406 aaKnown RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 ACTR1AP61163 376 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 SF1Q15637 639 aaKnown RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 ZBTB6Q15916 424 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 RAB6CQ53S08 254 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 LRIF1Q5T3J3 769 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 LYPLAL1Q5VWZ2 237 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 ADIPOR2Q86V24 386 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 THNSL2Q86YJ6 484 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 OR4C5Q8NGB2 326 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 SNIP1Q8TAD8 396 aaKnown RBP11.09□□□□□ -0.63
NPHP4-202ENST00000378161 MISP3Q96FF7 219 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 HMCESQ96FZ2 354 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 RAB6CQ9H0N0 254 aa11.09□□□□□ -0.63
NPHP4-202ENST00000378161 TEX13DA0A0J9YY54 714 aaPredicted RBP11.08□□□□□ -0.64
NPHP4-202ENST00000378161 SERPINA4P29622 427 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 SLC19A1P41440 591 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 AKR1C3P42330 323 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 ADPRHP54922 357 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 BEX5Q5H9J7 111 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 FRMPD2BQ6IN97 320 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 CXCL17Q6UXB2 119 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 LRRTM1Q86UE6 522 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 TCEANCQ8N8B7 351 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 POGLUT1Q8NBL1 392 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 C2CD4AQ8NCU7 369 aaPredicted RBP11.08□□□□□ -0.64
NPHP4-202ENST00000378161 ZCCHC10Q8TBK6 192 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 GPR152Q8TDT2 470 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 FCAMRQ8WWV6 532 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 ZIC5Q96T25 663 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 C20orf85Q9H1P6 137 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 MVB12BQ9H7P6 319 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 CFAP97Q9P2B7 532 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 SLC2A6Q9UGQ3 507 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 FZD4Q9ULV1 537 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 GTF2A1LQ9UNN4 478 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 DOCK2Q92608 1830 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 NFKBIEO00221 500 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 CLIC1O00299 241 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 KERAO60938 352 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 SCGNO76038 276 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 SCAF4O95104 1147 aaKnown RBP11.08□□□□□ -0.64
NPHP4-202ENST00000378161 BPNT1O95861 308 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 GIMD1P0DJR0 217 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 ARSAP15289 507 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 AHCYP23526 432 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 SMIM11AP58511 58 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 OR5I1Q13606 314 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 MICBQ29980 383 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 MARCH8Q5T0T0 291 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 ZFAND4Q86XD8 727 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 OR56B1Q8NGI3 324 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 C15orf40Q8WUR7 153 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 PSMG2Q969U7 264 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 HHIPQ96QV1 700 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 AIF1LQ9BQI0 150 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 MENTQ9BUN1 341 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 GAL3ST2Q9H3Q3 398 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 AHSPQ9NZD4 102 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 ICOSLGO75144 302 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms