RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 ENPP6Q6UWR7 440 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 APOOLQ6UXV4 268 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 FRRS1Q6ZNA5 592 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 EIF3MQ7L2H7 374 aaKnown RBP13.19□□□□□ -0.3
UBE4B-203ENST00000377153 YRDCQ86U90 279 aaKnown RBP13.19□□□□□ -0.3
UBE4B-203ENST00000377153 RETREG3Q86VR2 466 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 PEX5LQ8IYB4 626 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 FAM26EQ8N5C1 309 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 FADS6Q8N9I5 356 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 TOR1AIP2Q8NFQ8 470 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 RP9Q8TA86 221 aaKnown RBP13.19□□□□□ -0.3
UBE4B-203ENST00000377153 C1GALT1C1Q96EU7 318 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 ANKRD27Q96NW4 1050 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 CGREF1Q99674 301 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 SH3GL1Q99961 368 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 THUMPD3Q9BV44 507 aaKnown RBP13.19□□□□□ -0.3
UBE4B-203ENST00000377153 RTN4RQ9BZR6 473 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 TP63Q9H3D4 680 aaPredicted RBP13.19□□□□□ -0.3
UBE4B-203ENST00000377153 A4GALTQ9NPC4 353 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 GID8Q9NWU2 228 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 SLAMF8Q9P0V8 285 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 TINAGQ9UJW2 476 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 SLC35A3Q9Y2D2 325 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 ZNF835Q9Y2P0 537 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 GMEB1Q9Y692 573 aa13.19□□□□□ -0.3
UBE4B-203ENST00000377153 SPENQ96T58 3664 aaKnown RBP13.19□□□□□ -0.3
UBE4B-203ENST00000377153 A0A087WZY1 265 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 LOC100653049A0A140TA62 436 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 SERINC4A6NH21 518 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 NPIPB9F8W1W9 429 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 CCL21O00585 134 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 ZNF264O43296 627 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 UGT2B17O75795 530 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 KRT34O76011 436 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 CSTAP01040 98 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 C1QCP02747 245 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 DBIP07108 87 aaKnown RBP13.18□□□□□ -0.3
UBE4B-203ENST00000377153 IL7RP16871 459 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 TCEA1P23193 301 aaKnown RBP13.18□□□□□ -0.3
UBE4B-203ENST00000377153 ZNF117Q03924 483 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 CHRNEQ04844 493 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 SF3B4Q15427 424 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBE4B-203ENST00000377153 EIPR1Q53HC9 387 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 DLEU7Q6UYE1 221 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 Q6ZPB1 254 aaPredicted RBP13.18□□□□□ -0.3
UBE4B-203ENST00000377153 FJX1Q86VR8 437 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 KRT73Q86Y46 540 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 MSRB3Q8IXL7 192 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 CMIPQ8IY22 773 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 PM20D2Q8IYS1 436 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 METTL25Q8N6Q8 603 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 BBS10Q8TAM1 723 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 SLC38A5Q8WUX1 472 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 WDR60Q8WVS4 1066 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 CMTM5Q96DZ9 223 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 TMEM19Q96HH6 336 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 TREX2Q9BQ50 279 aaPredicted RBP13.18□□□□□ -0.3
UBE4B-203ENST00000377153 PIGQQ9BRB3 760 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 CPPED1Q9BRF8 314 aaPredicted RBP13.18□□□□□ -0.3
UBE4B-203ENST00000377153 SAP130Q9H0E3 1048 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 ARMC7Q9H6L4 198 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 STOML1Q9UBI4 398 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 RPH3AQ9Y2J0 694 aaPredicted RBP13.18□□□□□ -0.3
UBE4B-203ENST00000377153 SLC6A5Q9Y345 797 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 MRPS18CQ9Y3D5 142 aaKnown RBP13.18□□□□□ -0.3
UBE4B-203ENST00000377153 L3MBTL1Q9Y468 752 aa13.18□□□□□ -0.3
UBE4B-203ENST00000377153 A0A0G2JPF8 293 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 AGAP5A6NIR3 686 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 C17orf51A8MQB3 221 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 HNRNPCL2B2RXH8 293 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 HNRNPCL3B7ZW38 293 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 LINC01387J3KSC0 135 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 FBP2O00757 339 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 LRRTM2O43300 516 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 EIF4E2O60573 245 aaKnown RBP13.17□□□□□ -0.3
UBE4B-203ENST00000377153 HNRNPCL1O60812 293 aaKnown RBP13.17□□□□□ -0.3
UBE4B-203ENST00000377153 WDR1O75083 606 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 CYP7B1O75881 506 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 WISP2O76076 250 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 FAM107AO95990 144 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 CHRM4P08173 479 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 TFPTP0C1Z6 253 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 UBTFL6P0CB48 400 aaPredicted RBP13.17□□□□□ -0.3
UBE4B-203ENST00000377153 HNRNPCL4P0DMR1 293 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 BMP2P12643 396 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 UQCRBP14927 111 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 CD1EP15812 388 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 ZNF17P17021 662 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 GPX2P18283 190 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 SLC6A2P23975 617 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 RNF144AP50876 292 aaPredicted RBP13.17□□□□□ -0.3
UBE4B-203ENST00000377153 P2RX1P51575 399 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 MTPNP58546 118 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 CAPRIN1Q14444 709 aaKnown RBP13.17□□□□□ -0.3
UBE4B-203ENST00000377153 FGFBP1Q14512 234 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 C3AR1Q16581 482 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 GLYR1Q49A26 553 aaPredicted RBP13.17□□□□□ -0.3
UBE4B-203ENST00000377153 RUNDC3AQ59EK9 446 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 NHSL2Q5HYW2 709 aa13.17□□□□□ -0.3
UBE4B-203ENST00000377153 PRAMEF8Q5VWM4 474 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms