RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 KAT2AQ92830 837 aa11.83□□□□□ -0.52
CLCN6-205ENST00000376492 MTERF3Q96E29 417 aa11.83□□□□□ -0.52
CLCN6-205ENST00000376492 MAELQ96JY0 434 aaKnown RBP11.83□□□□□ -0.52
CLCN6-205ENST00000376492 AMDHD1Q96NU7 426 aa11.83□□□□□ -0.52
CLCN6-205ENST00000376492 TSSK3Q96PN8 268 aa11.83□□□□□ -0.52
CLCN6-205ENST00000376492 GLIPR2Q9H4G4 154 aa11.83□□□□□ -0.52
CLCN6-205ENST00000376492 CUBNO60494 3623 aa11.83□□□□□ -0.52
CLCN6-205ENST00000376492 SLC22A20A6NK97 555 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 H0YC42 278 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 TO15178 435 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 ACOX3O15254 700 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 NME6O75414 186 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-205ENST00000376492 SKAP2O75563 359 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-205ENST00000376492 DCTN3O75935 186 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 JUNP05412 331 aaKnown RBP11.82□□□□□ -0.52
CLCN6-205ENST00000376492 IFI6P09912 130 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 PRPS2P11908 318 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 NTSP30990 170 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 SRD5A2P31213 254 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 FRKP42685 505 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-205ENST00000376492 PPICP45877 212 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 KCNJ5P48544 419 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 NCBP2P52298 156 aaKnown RBP eCLIP11.82□□□□□ -0.522e-8■■□□□ 13.6
CLCN6-205ENST00000376492 ARFIP2P53365 341 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 TPD52P55327 224 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-205ENST00000376492 EMX2Q04743 252 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 CAPRIN1Q14444 709 aaKnown RBP11.82□□□□□ -0.52
CLCN6-205ENST00000376492 IL23RQ5VWK5 629 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 CGB2Q6NT52 195 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 R3HCC1LQ7Z5L2 792 aaKnown RBP11.82□□□□□ -0.52
CLCN6-205ENST00000376492 UBQLNLQ8IYU4 475 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 OR7G2Q8NG99 324 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 FIG4Q92562 907 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 GFM2Q969S9 779 aaKnown RBP11.82□□□□□ -0.52
CLCN6-205ENST00000376492 PPCDCQ96CD2 204 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 TUBGCP3Q96CW5 907 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 LCORQ96JN0 433 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-205ENST00000376492 ELAC2Q9BQ52 826 aaKnown RBP11.82□□□□□ -0.52
CLCN6-205ENST00000376492 CCDC28BQ9BUN5 200 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 GIMAP2Q9UG22 337 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 ATP6V1HQ9UI12 483 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 DKKL1Q9UK85 242 aa11.82□□□□□ -0.52
CLCN6-205ENST00000376492 C19orf53Q9UNZ5 99 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-205ENST00000376492 GPR55Q9Y2T6 319 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-205ENST00000376492 GOLGA8QA0A0J9YX86 632 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 GOLGA8OA6NCC3 632 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 FRG2CA6NGY1 282 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 RNF212BA8MTL3 300 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 GOLGA8NF8WBI6 632 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 C16orf97H3BN30 126 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 ZNF195O14628 629 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 AKAP10O43572 662 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 ZIC3O60481 467 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 CGAP01215 116 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 CRHP06850 196 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 PCYT1AP49585 367 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 B3GALT5-AS1P59052 145 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 MAD2L1Q13257 205 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-205ENST00000376492 TNK1Q13470 666 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 PDCD2Q16342 344 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-205ENST00000376492 FAM91A1Q658Y4 838 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 EPGNQ6UW88 154 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 PLEKHM3Q6ZWE6 761 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 PHC2Q8IXK0 858 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 OR2L13Q8N349 312 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 FNDC5Q8NAU1 212 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 CLHC1Q8NHS4 586 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 ACTRT2Q8TDY3 377 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 C10orf82Q8WW14 230 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 TMBIM1Q969X1 311 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 ELP4Q96EB1 424 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 ZNF845Q96IR2 970 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-205ENST00000376492 VSTM2LQ96N03 204 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 BTBD9Q96Q07 612 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 AKTIPQ9H8T0 292 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 ANKRA2Q9H9E1 313 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 MEAF6Q9HAF1 191 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 ACSS1Q9NUB1 689 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-205ENST00000376492 PNPOQ9NVS9 261 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 TMEM45AQ9NWC5 275 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 ASIC5Q9NY37 505 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 TAS2R9Q9NYW1 312 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 SH3BP4Q9P0V3 963 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 RAI1Q7Z5J4 1906 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-205ENST00000376492 MED12LQ86YW9 2145 aa11.81□□□□□ -0.52
CLCN6-205ENST00000376492 NBEAL1Q6ZS30 2694 aa11.8□□□□□ -0.52
CLCN6-205ENST00000376492 ROS1P08922 2347 aa11.8□□□□□ -0.52
CLCN6-205ENST00000376492 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.8□□□□□ -0.52
CLCN6-205ENST00000376492 UPK1AO00322 258 aa11.8□□□□□ -0.52
CLCN6-205ENST00000376492 SLC22A2O15244 555 aa11.8□□□□□ -0.52
CLCN6-205ENST00000376492 CCDC22O60826 627 aa11.8□□□□□ -0.52
CLCN6-205ENST00000376492 PSMG1O95456 288 aa11.8□□□□□ -0.52
CLCN6-205ENST00000376492 PLAUP00749 431 aa11.8□□□□□ -0.52
CLCN6-205ENST00000376492 THBDP07204 575 aa11.8□□□□□ -0.52
CLCN6-205ENST00000376492 CT45A8P0DMV1 189 aa11.8□□□□□ -0.52
CLCN6-205ENST00000376492 CT45A9P0DMV2 189 aa11.8□□□□□ -0.52
CLCN6-205ENST00000376492 DDX5P17844 614 aaKnown RBP11.8□□□□□ -0.52
CLCN6-205ENST00000376492 PRPS1L1P21108 318 aa11.8□□□□□ -0.52
CLCN6-205ENST00000376492 DPP4P27487 766 aa11.8□□□□□ -0.52
CLCN6-205ENST00000376492 RPL3P39023 403 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms