RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 AP1G1O43747 822 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 ACPPP15309 386 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 PTAFRP25105 342 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 RABIFP47224 123 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 UNQ6126/PRO20091Q6UXV3 157 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 MOB3CQ70IA8 216 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 SGPP2Q8IWX5 399 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 OR4N4Q8N0Y3 316 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 OR4K15Q8NH41 348 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 MRPL38Q96DV4 380 aaKnown RBP12.92□□□□□ -0.34
COL4A1-201ENST00000375820 DDX31Q9H8H2 851 aaKnown RBP12.92□□□□□ -0.34
COL4A1-201ENST00000375820 SMAD6O43541 496 aaKnown RBP12.92□□□□□ -0.34
COL4A1-201ENST00000375820 PAHP00439 452 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 SYPP08247 313 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 CEBPBP17676 345 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 POU3F2P20265 443 aaPredicted RBP12.92□□□□□ -0.34
COL4A1-201ENST00000375820 CD68P34810 354 aaPredicted RBP12.92□□□□□ -0.34
COL4A1-201ENST00000375820 OPRL1P41146 370 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 LRP10Q7Z4F1 713 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 VRK2Q86Y07 508 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 FOXJ1Q92949 421 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 MAGIXQ9H6Y5 334 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 OBP2BQ9NPH6 170 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 PCDHGA7Q9Y5G6 932 aa12.92□□□□□ -0.34
COL4A1-201ENST00000375820 ANKRD33BA6NCL7 494 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 ANKRD30BLA7E2S9 258 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 ARSBP15848 533 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 SOX9P48436 509 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 TMEM201Q5SNT2 666 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 SFRP5Q5T4F7 317 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 ZNF440Q8IYI8 595 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 CMTM1Q8IZ96 169 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 CCDC71LQ8N9Z2 235 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 COQ10AQ96MF6 247 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 RANBP9Q96S59 729 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 SERINC2Q96SA4 455 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 GPN2Q9H9Y4 310 aaPredicted RBP12.91□□□□□ -0.34
COL4A1-201ENST00000375820 IL23AQ9NPF7 189 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 MEPEQ9NQ76 525 aaPredicted RBP12.91□□□□□ -0.34
COL4A1-201ENST00000375820 MYH8P13535 1937 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 CD300LBA8K4G0 201 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 PHYHO14832 338 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 IL32P24001 234 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 RPS18P62269 152 aaKnown RBP12.91□□□□□ -0.34
COL4A1-201ENST00000375820 DESI1Q6ICB0 168 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 HSD11B1LQ7Z5J1 315 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 TRMT2BQ96GJ1 504 aaKnown RBP12.91□□□□□ -0.34
COL4A1-201ENST00000375820 MS4A4EQ96PG1 132 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 SNX18Q96RF0 628 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 ADOQ96SZ5 270 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 SLC45A1Q9Y2W3 748 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 C1orf196B1AJZ1 125 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 HSBP1L1C9JCN9 74 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 H0Y8G0 127 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 CLN5O75503 358 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 GAAP10253 952 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 ZNF44P15621 663 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 RNF4P78317 190 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 NKX6-1P78426 367 aaPredicted RBP12.91□□□□□ -0.34
COL4A1-201ENST00000375820 MS4A2Q01362 244 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 ZP2Q05996 745 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 AAK1Q2M2I8 961 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 TLDC1Q6P9B6 456 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 RSC1A1Q92681 617 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 RLIMQ9NVW2 624 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 ENSAO43768 121 aaKnown RBP12.91□□□□□ -0.34
COL4A1-201ENST00000375820 HOXB5P09067 269 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 UBL4AP11441 157 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 CA5AP35218 305 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 AHRP35869 848 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 HLCSP50747 726 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 ACTBP60709 375 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 ACTG1P63261 375 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 MAT1AQ00266 395 aaKnown RBP12.91□□□□□ -0.34
COL4A1-201ENST00000375820 CACNG2Q9Y698 323 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 PABPC4LP0CB38 370 aaKnown RBP12.91□□□□□ -0.34
COL4A1-201ENST00000375820 NFATC3Q12968 1075 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 AGAP7PQ5VUJ5 663 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 AGAP6Q5VW22 663 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 NADSYN1Q6IA69 706 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 MDGA1Q8NFP4 955 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 OR8J2Q8NGG1 315 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 AGAP4Q96P64 663 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 TRIB3Q96RU7 358 aa12.91□□□□□ -0.34
COL4A1-201ENST00000375820 GJE1A6NN92 205 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 G3V3Y1 287 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 STK17BO94768 372 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 NDUFB2O95178 105 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 SLC34A2O95436 690 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 FAM163BP0C2L3 166 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 EXOSC6Q5RKV6 272 aaKnown RBP12.9□□□□□ -0.34
COL4A1-201ENST00000375820 VASNQ6EMK4 673 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 HEPHL1Q6MZM0 1159 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 C6orf89Q6UWU4 347 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 LRRTM3Q86VH5 581 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 B3GNT7Q8NFL0 401 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 LMO3Q8TAP4 145 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 NDUFAF4Q9P032 175 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 PRSS21Q9Y6M0 314 aa12.9□□□□□ -0.34
COL4A1-201ENST00000375820 LRRTM2O43300 516 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms