RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 APOOQ9BUR5 198 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 ENKD1Q9H0I2 346 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 HDHD2Q9H0R4 259 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 KIR3DX1Q9H7L2 352 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 SIDT1Q9NXL6 827 aaKnown RBP13.54□□□□□ -0.24
MSH5-201ENST00000375703 CENPVL1A0A0U1RR11 272 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 A0A1W2PQU0 124 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 TRAPPC13A5PLN9 417 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 BTN3A3O00478 584 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 HRO43593 1189 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 ORC5O43913 435 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 GKN3PP0CG01 181 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 PRG2P13727 222 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 RPS15AP62244 130 aaKnown RBP13.54□□□□□ -0.24
MSH5-201ENST00000375703 SNRPNP63162 240 aaKnown RBP13.54□□□□□ -0.24
MSH5-201ENST00000375703 EEF1A1P68104 462 aaKnown RBP13.54□□□□□ -0.24
MSH5-201ENST00000375703 EFR3AQ14156 821 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 TCEA2Q15560 299 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 KLHL12Q53G59 568 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 EIPR1Q53HC9 387 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 GET4Q7L5D6 327 aaPredicted RBP13.54□□□□□ -0.24
MSH5-201ENST00000375703 ASPGQ86U10 573 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 PAQR7Q86WK9 346 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 NR2C2APQ86WQ0 139 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 TMEM99Q8N816 258 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 OR14C36Q8NHC7 312 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 GRPEL2Q8TAA5 225 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 HS6ST2Q96MM7 605 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 ING3Q9NXR8 418 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 HEBP2Q9Y5Z4 205 aa13.54□□□□□ -0.24
MSH5-201ENST00000375703 A0A0G2JMP0 313 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 A0A0X1KG70 313 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 SLC43A1O75387 559 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 CHRNB1P11230 501 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 MAKP20794 623 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 MAT2AP31153 395 aaKnown RBP13.53□□□□□ -0.24
MSH5-201ENST00000375703 SIM1P81133 766 aaPredicted RBP13.53□□□□□ -0.24
MSH5-201ENST00000375703 TNFRSF17Q02223 184 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 NIPAL3Q6P499 406 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 ADGRD2Q7Z7M1 963 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 LIX1LQ8IVB5 337 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 SAMD14Q8IZD0 417 aaPredicted RBP13.53□□□□□ -0.24
MSH5-201ENST00000375703 OR2L13Q8N349 312 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 OR4M2Q8NGB6 313 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 FANK1Q8TC84 345 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 TIMP4Q99727 224 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 FN3KQ9H479 309 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 ACOXLQ9NUZ1 547 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 OR6C2Q9NZP2 312 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 KCMF1Q9P0J7 381 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 CPNE3O75131 537 aaKnown RBP13.53□□□□□ -0.24
MSH5-201ENST00000375703 REM1O75628 298 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 IFI30P13284 250 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 SHC1P29353 583 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 IGFALSP35858 605 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 FXYD6P3P58550 94 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 HTRA3P83110 453 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 DBPQ10586 325 aaPredicted RBP13.53□□□□□ -0.24
MSH5-201ENST00000375703 MAPK14Q16539 360 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 TRMT12Q53H54 448 aaKnown RBP13.53□□□□□ -0.24
MSH5-201ENST00000375703 TMEM240Q5SV17 173 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 PRPF38BQ5VTL8 546 aaKnown RBP13.53□□□□□ -0.24
MSH5-201ENST00000375703 FBXO42Q6P3S6 717 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 RNF113BQ8IZP6 322 aaKnown RBP13.53□□□□□ -0.24
MSH5-201ENST00000375703 OR10H4Q8NGA5 316 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 OR5W2Q8NH69 310 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 PFN4Q8NHR9 129 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 DOK4Q8TEW6 326 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 TMEM239Q8WW34 195 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 BADQ92934 168 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 GFM1Q96RP9 751 aaKnown RBP13.53□□□□□ -0.24
MSH5-201ENST00000375703 HCAR1Q9BXC0 346 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 ATP13A2Q9NQ11 1180 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 TRPV5Q9NQA5 729 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 RWDD3Q9Y3V2 267 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 CHD7Q9P2D1 2997 aa13.53□□□□□ -0.24
MSH5-201ENST00000375703 C5orf42Q9H799 3197 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 INMT-MINDY4F8WBC2 141 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 BHLHE40O14503 412 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 ARHGEF9O43307 516 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 THBS1P07996 1170 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 TLX1P31314 330 aaPredicted RBP13.52□□□□□ -0.24
MSH5-201ENST00000375703 GZMKP49863 264 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 GALEQ14376 348 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 OR1Q1Q15612 314 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 DEFB134Q4QY38 66 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 HBMQ6B0K9 141 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 WDR88Q6ZMY6 472 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 OR5M3Q8NGP4 307 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 ZCCHC10Q8TBK6 192 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 ZFAND1Q8TCF1 268 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 UBL7Q96S82 380 aaPredicted RBP13.52□□□□□ -0.24
MSH5-201ENST00000375703 GON7Q9BXV9 100 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 TRIM36Q9NQ86 728 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 C20orf141Q9NUB4 165 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 PHF11Q9UIL8 331 aa13.52□□□□□ -0.24
MSH5-201ENST00000375703 ZNF223Q9UK11 482 aaPredicted RBP13.52□□□□□ -0.24
MSH5-201ENST00000375703 DNAJB6O75190 326 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 ALX3O95076 343 aa13.52□□□□□ -0.25
MSH5-201ENST00000375703 SLC35G6P0C7Q6 338 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms