RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 PRSS58Q8IYP2 241 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 FRMD1Q8N878 549 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 FBXO22Q8NEZ5 403 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 MCHR2Q969V1 340 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 STACQ99469 402 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 S1PR3Q99500 378 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 NICN1Q9BSH3 213 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 CHRNA10Q9GZZ6 450 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 HSPB8Q9UJY1 196 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF281Q9Y2X9 895 aa5.66□□□□□ -1.5
SCN2A-202ENST00000375427 A1BGP04217 495 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 IL4P05112 153 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 ACP5P13686 325 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 TNFSF4P23510 183 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 SLC18A1P54219 525 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 LEXMQ3ZCV2 418 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM64Q6YI46 380 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF595Q8IYB9 648 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 SLCO2A1Q92959 643 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 PGLYRP2Q96PD5 576 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 SMOXQ9NWM0 555 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 MYOTQ9UBF9 498 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 NDRG3Q9UGV2 375 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 MED12LQ86YW9 2145 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 A0A0J9YYE9 177 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 LDB2O43679 373 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 FCGR3BO75015 233 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 HPNP05981 417 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 HSD17B1P14061 328 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 SDHBP21912 280 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 KHKP50053 298 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 NDST1P52848 882 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 METAP1P53582 386 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 AESQ08117 197 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 FABP9Q0Z7S8 132 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 GRM3Q14832 879 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 KIAA1324Q6UXG2 1013 aaKnown RBP5.65□□□□□ -1.5
SCN2A-202ENST00000375427 HTR3DQ70Z44 454 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 MMP21Q8N119 569 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 BVESQ8NE79 360 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 THAP3Q8WTV1 239 aaPredicted RBP5.65□□□□□ -1.5
SCN2A-202ENST00000375427 LRRN4Q8WUT4 740 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 OR1F2PQ96R84 312 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 COQ4Q9Y3A0 265 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF536O15090 1300 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 OR5K3A6NET4 321 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 ANTXRLA6NF34 631 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 SYN3O14994 580 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 MT-ND1P03886 318 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 FTH1P19P0C7X4 201 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 CDX1P47902 265 aaPredicted RBP5.65□□□□□ -1.5
SCN2A-202ENST00000375427 TOB1P50616 345 aaPredicted RBP5.65□□□□□ -1.5
SCN2A-202ENST00000375427 SPCS3P61009 180 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 ACTR1AP61163 376 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 OR4S1Q8NGB4 309 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 OR5D16Q8NGK9 328 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 LYSMD1Q96S90 227 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 TBX5Q99593 518 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 MGST2Q99735 147 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 OBP2BQ9NPH6 170 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 ELOVL2Q9NXB9 296 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 OBP2AQ9NY56 170 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 KCNK6Q9Y257 313 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF736B4DX44 427 aaPredicted RBP5.65□□□□□ -1.5
SCN2A-202ENST00000375427 NDUFC2O95298 119 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 CRABP1P29762 137 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 CEBPAP49715 358 aaPredicted RBP5.65□□□□□ -1.5
SCN2A-202ENST00000375427 COMPP49747 757 aaPredicted RBP5.65□□□□□ -1.5
SCN2A-202ENST00000375427 NKX2-5P52952 324 aaPredicted RBP5.65□□□□□ -1.5
SCN2A-202ENST00000375427 SHC2P98077 582 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 CXCL9Q07325 125 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 GRM7Q14831 915 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 ATAT1Q5SQI0 421 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 RPL22L1Q6P5R6 122 aaKnown RBP5.65□□□□□ -1.5
SCN2A-202ENST00000375427 BRAT1Q6PJG6 821 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 TSSK4Q6SA08 328 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 COX18Q8N8Q8 333 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 C7orf57Q8NEG2 295 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF519Q8TB69 540 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 GPR152Q8TDT2 470 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM169Q96HH4 297 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 CMKLR1Q99788 373 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 ELOVL3Q9HB03 270 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 GPR83Q9NYM4 423 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 DNPEPQ9ULA0 475 aa5.65□□□□□ -1.5
SCN2A-202ENST00000375427 FER1L6Q2WGJ9 1857 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 UNC13AQ9UPW8 1703 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 SLC12A8A0AV02 714 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 H0YIN7 160 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 M0QYT0 321 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 CLIC3O95833 236 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 PTAFRP25105 342 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 CKS1BP61024 79 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 ZNF385BQ569K4 471 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 C12orf54Q6X4T0 127 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 ABHD13Q7L211 337 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 GPR135Q8IZ08 494 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 SLC38A9Q8NBW4 561 aa5.65□□□□□ -1.51
SCN2A-202ENST00000375427 CHDHQ8NE62 594 aaPredicted RBP5.65□□□□□ -1.51
SCN2A-202ENST00000375427 OR13C8Q8NGS7 320 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms