RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 REM1O75628 298 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 PLCXD2Q0VAA5 305 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 KLHL26Q53HC5 615 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 ZNF550Q7Z398 422 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 PARP8Q8N3A8 854 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 OR8K3Q8NH51 312 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 NUBPLQ8TB37 319 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 GTPBP3Q969Y2 492 aaKnown RBP24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 C8orf44Q96CB5 159 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 SLC41A3Q96GZ6 507 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 ZNF559Q9BR84 538 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 MESP1Q9BRJ9 268 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 DNAJB12Q9NXW2 375 aaKnown RBP24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 ZNF223Q9UK11 482 aaPredicted RBP24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 SLC35A3Q9Y2D2 325 aa24.23■■□□□ 1.47
ATPAF1-202ENST00000371937 CDC14CA4D256 554 aa24.22■■□□□ 1.47
ATPAF1-202ENST00000371937 TRAPPC13A5PLN9 417 aa24.22■■□□□ 1.47
ATPAF1-202ENST00000371937 EIF4E1BA6NMX2 242 aaKnown RBP24.22■■□□□ 1.47
ATPAF1-202ENST00000371937 PRG2P13727 222 aa24.22■■□□□ 1.47
ATPAF1-202ENST00000371937 RNF144AP50876 292 aaPredicted RBP24.22■■□□□ 1.47
ATPAF1-202ENST00000371937 NRG3P56975 720 aa24.22■■□□□ 1.47
ATPAF1-202ENST00000371937 TMEM154Q6P9G4 183 aa24.22■■□□□ 1.47
ATPAF1-202ENST00000371937 THAP5Q7Z6K1 395 aa24.22■■□□□ 1.47
ATPAF1-202ENST00000371937 OR4K5Q8NGD3 323 aa24.22■■□□□ 1.47
ATPAF1-202ENST00000371937 ADOQ96SZ5 270 aa24.22■■□□□ 1.47
ATPAF1-202ENST00000371937 EP300Q09472 2414 aaPredicted RBP24.22■■□□□ 1.47
ATPAF1-202ENST00000371937 SCDO00767 359 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 ABCB7O75027 752 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 UTS2O95399 124 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 DLGAP3O95886 979 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 UMODP07911 640 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 CYP4B1P13584 511 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 POU2F1P14859 743 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 TBXA2RP21731 343 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 IFNGR2P38484 337 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 ADH7P40394 386 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 UGT2B15P54855 530 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 SLC26A5P58743 744 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 PLAURQ03405 335 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 BLMHQ13867 455 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 TTC33Q6PID6 262 aaPredicted RBP24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 GDF7Q7Z4P5 450 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 SETD9Q8NE22 299 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 DEFB124Q8NES8 71 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 OR5L2Q8NGL0 311 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 DGCR6LQ9BY27 220 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 ING2Q9H160 280 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 ZNF696Q9H7X3 374 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 MYRFQ9Y2G1 1151 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 NTNG1Q9Y2I2 539 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 PMS2P1A4D2B8 440 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 BCAS1O75363 584 aaPredicted RBP24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 CSTAP01040 98 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 IGHEP01854 428 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 ABCD3P28288 659 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 FOLR3P41439 243 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 PNLIPRP2P54317 469 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 OR1Q1Q15612 314 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 ZNF691Q5VV52 312 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 PGBD2Q6P3X8 592 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 RRM2BQ7LG56 351 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 PRR22Q8IZ63 422 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 TMEM27Q9HBJ8 222 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 NDRG4Q9ULP0 352 aaKnown RBP24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 GMPPBQ9Y5P6 360 aa24.21■■□□□ 1.47
ATPAF1-202ENST00000371937 C9orf172C9J069 976 aa24.2■■□□□ 1.46
ATPAF1-202ENST00000371937 TSPAN2O60636 221 aa24.2■■□□□ 1.46
ATPAF1-202ENST00000371937 TARDBPQ13148 414 aaKnown RBP eCLIP24.2■■□□□ 1.46
ATPAF1-202ENST00000371937 ZNF440Q8IYI8 595 aa24.2■■□□□ 1.46
ATPAF1-202ENST00000371937 OMA1Q96E52 524 aa24.2■■□□□ 1.46
ATPAF1-202ENST00000371937 APOL4Q9BPW4 351 aa24.2■■□□□ 1.46
ATPAF1-202ENST00000371937 UCK2Q9BZX2 261 aa24.2■■□□□ 1.46
ATPAF1-202ENST00000371937 SPRY4Q9C004 299 aa24.2■■□□□ 1.46
ATPAF1-202ENST00000371937 A0A087WUU8 490 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 TRBV11-1A0A0K0K1C0 115 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 HTR2AP28223 471 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 RYKP34925 604 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 CLK3P49761 638 aaKnown RBP24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 ZNF613Q6PF04 617 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 ZNF730Q6ZMV8 503 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 ZNF786Q8N393 782 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 ACOT11Q8WXI4 607 aaPredicted RBP24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 TRIM2Q9C040 744 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 BATF3Q9NR55 127 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 SLC7A7Q9UM01 511 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 HSPE1-MOB4S4R3N1 261 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 A0A1W2PNU3 283 aaPredicted RBP24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 H3BNH8 94 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 ZFAND5O76080 213 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 DKK1O94907 266 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 RAB40ALP0C0E4 278 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 ESRRGP62508 458 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 RPP38P78345 283 aaKnown RBP24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 COX10Q12887 443 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 KLHL17Q6TDP4 642 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 HRASLS5Q96KN8 279 aa24.19■■□□□ 1.46
ATPAF1-202ENST00000371937 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.18■■□□□ 1.46
ATPAF1-202ENST00000371937 E9PQ18 207 aa24.18■■□□□ 1.46
ATPAF1-202ENST00000371937 THY1P04216 161 aa24.18■■□□□ 1.46
ATPAF1-202ENST00000371937 NGFRP08138 427 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms