RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ZNF860A6NHJ4 632 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 CDC7O00311 574 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 TBX1O43435 398 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 RGS14O43566 566 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 SEC22BO75396 215 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 UGT2B17O75795 530 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 NEURL1O76050 574 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 KCNK2O95069 426 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 SIX3O95343 332 aaPredicted RBP13.78□□□□□ -0.2
LMO4-201ENST00000370542 GUCA1CO95843 209 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 MT-ND1P03886 318 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 ZNF888P0CJ79 500 aaPredicted RBP13.78□□□□□ -0.2
LMO4-201ENST00000370542 TGFBR2P37173 567 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 SLC6A12P48065 614 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 HNMTP50135 292 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 UGT2B15P54855 530 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 MAD2L1BPQ15013 274 aaPredicted RBP13.78□□□□□ -0.2
LMO4-201ENST00000370542 CDK10Q15131 360 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 PCBP2Q15366 365 aaKnown RBP eCLIP13.78□□□□□ -0.2
LMO4-201ENST00000370542 ZFP69Q49AA0 526 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 KRTCAP3Q53RY4 240 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.78□□□□□ -0.2
LMO4-201ENST00000370542 TMEM236Q5W0B7 351 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 KDM4DQ6B0I6 523 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 FCRLBQ6BAA4 426 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 SP5Q6BEB4 398 aaPredicted RBP13.78□□□□□ -0.2
LMO4-201ENST00000370542 DESI1Q6ICB0 168 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 ERICH5Q6P6B1 374 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 CCBE1Q6UXH8 406 aaPredicted RBP13.78□□□□□ -0.2
LMO4-201ENST00000370542 Q6ZPB1 254 aaPredicted RBP13.78□□□□□ -0.2
LMO4-201ENST00000370542 ABHD13Q7L211 337 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 CALHM3Q86XJ0 350 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 KRT73Q86Y46 540 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 SLC5A8Q8N695 610 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 NFAM1Q8NET5 270 aaPredicted RBP13.78□□□□□ -0.2
LMO4-201ENST00000370542 IL17RDQ8NFM7 739 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 CHTF18Q8WVB6 975 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 HTRA1Q92743 480 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 RHBDF1Q96CC6 855 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 SIGLEC11Q96RL6 698 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 KCNA7Q96RP8 456 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 UTP23Q9BRU9 249 aaKnown RBP13.78□□□□□ -0.2
LMO4-201ENST00000370542 TRAF4Q9BUZ4 470 aaPredicted RBP13.78□□□□□ -0.2
LMO4-201ENST00000370542 THUMPD3Q9BV44 507 aaKnown RBP13.78□□□□□ -0.2
LMO4-201ENST00000370542 NUAK2Q9H093 628 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 C1orf109Q9NX04 203 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 RNF6Q9Y252 685 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 SLC22A14Q9Y267 594 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 CFL2Q9Y281 166 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 RBMX2Q9Y388 322 aaKnown RBP13.78□□□□□ -0.2
LMO4-201ENST00000370542 OARD1Q9Y530 152 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 PCDHB14Q9Y5E9 798 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 KCNE2Q9Y6J6 123 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 V9GYQ6 96 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 DCHS2Q6V1P9 2916 aa13.78□□□□□ -0.2
LMO4-201ENST00000370542 URADA6NGE7 173 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 HMX3A6NHT5 357 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 C4orf51C9J302 202 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 ANKRD28O15084 1053 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 CDC123O75794 336 aaPredicted RBP13.77□□□□□ -0.21
LMO4-201ENST00000370542 B3GALT4O96024 378 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 OTCP00480 354 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 PCNAP12004 261 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 TRHRP34981 398 aaPredicted RBP13.77□□□□□ -0.21
LMO4-201ENST00000370542 ALDH9A1P49189 494 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 OR2B6P58173 313 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 MTPNP58546 118 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 NCS1P62166 190 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 MRPS15P82914 257 aaKnown RBP13.77□□□□□ -0.21
LMO4-201ENST00000370542 PMP22Q01453 160 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 GTF3C1Q12789 2109 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 E2F2Q14209 437 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 OR1C1Q15619 314 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 MAPKAPK3Q16644 382 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 MTFR2Q6P444 385 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 RPS19BP1Q86WX3 136 aaKnown RBP13.77□□□□□ -0.21
LMO4-201ENST00000370542 ZNF227Q86WZ6 799 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 GPSM1Q86YR5 675 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 SIAH3Q8IW03 269 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 UBQLNLQ8IYU4 475 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 METTL4Q8N3J2 472 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 TMEM132CQ8N3T6 1108 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 ZNF808Q8N4W9 903 aaPredicted RBP13.77□□□□□ -0.21
LMO4-201ENST00000370542 FAM120BQ96EK7 910 aaKnown RBP13.77□□□□□ -0.21
LMO4-201ENST00000370542 CCDC120Q96HB5 630 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 TEX37Q96LM6 180 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 LURAP1Q96LR2 239 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 GPR137Q96N19 417 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 FRMD6Q96NE9 622 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 AIF1LQ9BQI0 150 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 C3orf14Q9HBI5 128 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 QPCTLQ9NXS2 382 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 GIMAP2Q9UG22 337 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 PPIEQ9UNP9 301 aaKnown RBP13.77□□□□□ -0.21
LMO4-201ENST00000370542 CAB39Q9Y376 341 aaPredicted RBP13.77□□□□□ -0.21
LMO4-201ENST00000370542 CLDN16Q9Y5I7 305 aa13.77□□□□□ -0.21
LMO4-201ENST00000370542 PKDREJQ9NTG1 2253 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 A0A096LPI6 279 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 GABRR3A8MPY1 467 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 PRMT3O60678 531 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms