RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 CKMT1AP12532 417 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 AP2S1P53680 142 aaPredicted RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 PCBP4P57723 403 aaKnown RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 RAB25P57735 213 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 TBCEQ15813 527 aaPredicted RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 NNATQ16517 81 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 TCEAL6Q6IPX3 200 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 IKBIPQ70UQ0 350 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 MCATQ8IVS2 390 aaKnown RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 TIGD4Q8IY51 512 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 SLC34A3Q8N130 599 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 ZNF655Q8N720 491 aaPredicted RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 KBTBD8Q8NFY9 601 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 SLC9A6Q92581 669 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 TCEAL3Q969E4 200 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 GAL3ST3Q96A11 431 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 TMEM19Q96HH6 336 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 PRR14Q9BWN1 585 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 C1QTNF6Q9BXI9 259 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 SPRTNQ9H040 489 aaPredicted RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 ADAP2Q9NPF8 381 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 ZNF224Q9NZL3 707 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 DHCR7Q9UBM7 475 aaKnown RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 TRBV4-1A0A0J9YWV2 114 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 SMIM30A4D0T7 59 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 PLD2O14939 933 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 SLITRK5O94991 958 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 UQCRC2P22695 453 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 TNFSF8P32971 234 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 CAPZBP47756 277 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 EXOSC7Q15024 291 aaKnown RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 TRMT12Q53H54 448 aaKnown RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 RBM45Q8IUH3 476 aaKnown RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 TMEM151BQ8IW70 566 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 OR8H3Q8N146 312 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 CAMKVQ8NCB2 501 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 SLC38A5Q8WUX1 472 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 GFM1Q96RP9 751 aaKnown RBP9.93□□□□□ -0.82
TPM3-212ENST00000368533 NUDT22Q9BRQ3 303 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 ZNF780BQ9Y6R6 833 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 DMXL1Q9Y485 3027 aa9.93□□□□□ -0.82
TPM3-212ENST00000368533 CNTRLQ7Z7A1 2325 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 PRAMEF27A3QJZ7 478 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 ARHGEF9O43307 516 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 FRS3O43559 492 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 FGF17O60258 216 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 ARAFP10398 606 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 CHMP24386 653 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 RGS6P49758 472 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 CRISP1P54107 249 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 PRKCDQ05655 676 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 POU4F3Q15319 338 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 FLYWCH1Q4VC44 716 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 C14orf28Q4W4Y0 310 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 CCNJQ5T5M9 372 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 SLC48A1Q6P1K1 146 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 FAM122CQ6P4D5 195 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 SLC36A4Q6YBV0 504 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 SLC46A3Q7Z3Q1 461 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 OR4C15Q8NGM1 316 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 GPR151Q8TDV0 419 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 OR5P2Q8WZ92 322 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 RIT1Q92963 219 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 MARC2Q969Z3 335 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 MGLLQ99685 303 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 RSPO3Q9BXY4 272 aaPredicted RBP9.92□□□□□ -0.82
TPM3-212ENST00000368533 SEMA3GQ9NS98 782 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 SEC14L3Q9UDX4 400 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 DAPP1Q9UN19 280 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 PNMA8CA0A1B0GUJ8 204 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 MRPS14O60783 128 aaKnown RBP9.92□□□□□ -0.82
TPM3-212ENST00000368533 RHCEP18577 417 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 NUDT1P36639 197 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 XCR1P46094 333 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 OR1D4P47884 311 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 RHAGQ02094 409 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 CFHR1Q03591 330 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 DCST1Q5T197 706 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 C1orf189Q5VU69 101 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 MRM1Q6IN84 353 aaKnown RBP9.92□□□□□ -0.82
TPM3-212ENST00000368533 KLHL17Q6TDP4 642 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 CASP12Q6UXS9 341 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 SHISA6Q6ZSJ9 500 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 BCDIN3DQ7Z5W3 292 aaKnown RBP9.92□□□□□ -0.82
TPM3-212ENST00000368533 LILRB1Q8NHL6 650 aaPredicted RBP9.92□□□□□ -0.82
TPM3-212ENST00000368533 ZG16BQ96DA0 208 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 MMABQ96EY8 250 aaPredicted RBP9.92□□□□□ -0.82
TPM3-212ENST00000368533 SLC35G5Q96KT7 338 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 CNPPD1Q9BV87 410 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 GON7Q9BXV9 100 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 SEMA6CQ9H3T2 930 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 TMEM38AQ9H6F2 299 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 NPAP1Q9NZP6 1156 aa9.92□□□□□ -0.82
TPM3-212ENST00000368533 TMEM184BQ9Y519 407 aaPredicted RBP9.92□□□□□ -0.82
TPM3-212ENST00000368533 TP53BP1Q12888 1972 aaPredicted RBP9.92□□□□□ -0.82
TPM3-212ENST00000368533 NPIPA5A0A0B4J1W7 369 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 NPIPA7E9PJI5 369 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 HMGN4O00479 90 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 KIAA0513O60268 411 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms