RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 MAOBP27338 520 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 NKPD1Q17RQ9 610 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 GOLM1Q8NBJ4 401 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 OR1J2Q8NGS2 313 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 SLC7A13Q8TCU3 470 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 FOXRED1Q96CU9 486 aaPredicted RBP14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 LIN37Q96GY3 246 aaPredicted RBP14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 ALG8Q9BVK2 526 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 KLHL42Q9P2K6 505 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 SPO11Q9Y5K1 396 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 IER3IP1Q9Y5U9 82 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 WDPCPO95876 746 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 MICAQ29983 383 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 TMEM244Q5VVB8 128 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 FAIMQ9NVQ4 179 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 BTNL2Q9UIR0 455 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 SC5DO75845 299 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 TOXO94900 526 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 TP53I3Q53FA7 332 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 PNCKQ6P2M8 343 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 SMIM15Q7Z3B0 74 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 TECPR1Q7Z6L1 1165 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 AGBL5Q8NDL9 886 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 OR5W2Q8NH69 310 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 DAZAP1Q96EP5 407 aaKnown RBP14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 C5AR2Q9P296 337 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 hCG_1809904A0A1W2PP81 198 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 A0A1W2PPE2 198 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 A0A1W2PR64 198 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 A0A1W2PRV1 198 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 NOTOA8MTQ0 251 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 CEBPZOSA8MTT3 80 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 MTHFD2P13995 350 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 WDR5P61964 334 aaKnown RBP14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 KRBOX4Q5JUW0 171 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 C6orf183Q5T699 404 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 MEX3BQ6ZN04 569 aaKnown RBP14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 GPR83Q9NYM4 423 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 VSX1Q9NZR4 365 aaPredicted RBP14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 PHLPP1O60346 1717 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 RNF212BA8MTL3 300 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 SEC61A1P61619 476 aaKnown RBP14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 CLLU1OSQ5K130 101 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 GARNL3Q5VVW2 1013 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 PDZD9Q8IXQ8 264 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 IL17RDQ8NFM7 739 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 OR5D16Q8NGK9 328 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 IL1F10Q8WWZ1 152 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 DCUN1D4Q92564 292 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 CIDECQ96AQ7 238 aaPredicted RBP14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 UPRTQ96BW1 309 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 ARMC1Q9NVT9 282 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 CPNE7Q9UBL6 633 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 RIMS3Q9UJD0 308 aa14.79□□□□□ -0.04
NUCKS1-201ENST00000367142 DCDC2BA2VCK2 349 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 RNASET2O00584 256 aaKnown RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 YKT6O15498 198 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 JAG1P78504 1218 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 MAP4K2Q12851 820 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 COL9A3Q14050 684 aaPredicted RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 CDHR3Q6ZTQ4 885 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 RNF175Q8N4F7 328 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 FUBP1Q96AE4 644 aaKnown RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 FEVQ99581 238 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 RNF38Q9H0F5 515 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 NMNAT1Q9HAN9 279 aaPredicted RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 ZNF355PQ9NSJ1 428 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 NPIPB15A6NHN6 443 aaPredicted RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 CLN5O75503 358 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 CHRM4P08173 479 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 MRPS21P82921 87 aaKnown RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 ZNF423Q2M1K9 1284 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 SLX4IPQ5VYV7 408 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 GTPBP8Q8N3Z3 284 aaPredicted RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 ZMYND19Q96E35 227 aaPredicted RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 RTP3Q9BQQ7 232 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 IQCF1Q8N6M8 205 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 POT1Q9NUX5 634 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 PARP4Q9UKK3 1724 aaKnown RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 A0A0U1RQK1 487 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 ARSDP51689 593 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 STEAP3Q658P3 488 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 KIAA1211LQ6NV74 962 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 ASRGL1Q7L266 308 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 TMEM135Q86UB9 458 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 ISG20Q96AZ6 181 aaKnown RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 TIMM29Q9BSF4 260 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 ULBP2Q9BZM5 246 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 SOX17Q9H6I2 414 aaPredicted RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 DECR2Q9NUI1 292 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 YARS2Q9Y2Z4 477 aaKnown RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 GNB3P16520 340 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 IL2RGP31785 369 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 RGS6P49758 472 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 TRA2BP62995 288 aaKnown RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 SLC10A2Q12908 348 aaPredicted RBP14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 WBP2NLQ6ICG8 309 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 CPXM2Q8N436 756 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 STEAP2Q8NFT2 490 aa14.78□□□□□ -0.04
NUCKS1-201ENST00000367142 CNOT9Q92600 299 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms