RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CHIAQ9BZP6 476 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 COMMD4Q9H0A8 199 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 POLR3FQ9H1D9 316 aaPredicted RBP2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 COG4Q9H9E3 785 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 PATZ1Q9HBE1 687 aaKnown RBP2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 IFT52Q9Y366 437 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 MAB21L2Q9Y586 359 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 IGHV1OR15-1A0A075B7D0 117 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 IGHV7-81A0A0B4J1V7 117 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 WASHC1A8K0Z3 465 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 WASH3PC4AMC7 463 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 ANKRD63C9JTQ0 380 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 E9PMD0 336 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 SGK494L7N484 410 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 BBOX1O75936 387 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 CHRNA1P02708 482 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 ANXA4P09525 319 aaPredicted RBP2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 ALOX5P09917 674 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 BTDP43251 543 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 NUP107P57740 925 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 LDLRAP1Q5SW96 308 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 CYB5R2Q6BCY4 276 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 PVRIGQ6DKI7 326 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 OR8G2PQ6IF36 304 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 WASH2PQ6VEQ5 465 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 LCA5Q86VQ0 697 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 OR2AP1Q8NGE2 309 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 ATP6V0A1Q93050 837 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 MYDGFQ969H8 173 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 STARD4Q96DR4 205 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 RNF126Q9BV68 326 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 XPO4Q9C0E2 1151 aaKnown RBP2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 SLC25A51Q9H1U9 297 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 NARFLQ9H6Q4 476 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 MTRRQ9UBK8 725 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 ZNF223Q9UK11 482 aaPredicted RBP2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 NOL7Q9UMY1 257 aaKnown RBP2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 PLA2G4CQ9UP65 541 aa2.74□□□□□ -1.97
RNU4-28P-201ENST00000364739 CFAP73A6NFT4 308 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 FAM74A7A6NL05 159 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 TMEM110-MUSTN1A8MSY1 372 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 BCAS2O75934 225 aaPredicted RBP2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 NTSP30990 170 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 SFNP31947 248 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 HPDP32754 393 aaPredicted RBP2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 APOC4P55056 127 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 SNX1Q13596 522 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 EXOSC2Q13868 293 aaKnown RBP2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 FAM74A3Q4VXF1 159 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 ATF7IP2Q5U623 682 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 RABEPKQ7Z6M1 372 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 TMEM110Q86TL2 294 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 SUMF2Q8NBJ7 301 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 M1APQ8TC57 530 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 UPRTQ96BW1 309 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 TBX15Q96SF7 602 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 ATP6V0BQ99437 205 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 NRTNQ99748 197 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 TMEM231Q9H6L2 316 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 RPAP3Q9H6T3 665 aaPredicted RBP2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 RAB26Q9ULW5 256 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 WDR45Q9Y484 360 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 PLEKHG1Q9ULL1 1385 aa2.73□□□□□ -1.97
RNU4-28P-201ENST00000364739 LOC100131303A0A0U1RQF7 123 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 RNF222A6NCQ9 220 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 ARHGAP42A6NI28 874 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 SLC9B1P1A6NJY1 282 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 ZNF705EA8MWA4 302 aaPredicted RBP2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 DDX39AO00148 427 aaKnown RBP2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 LGALS8O00214 317 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 HOXD10P28358 340 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 HTR1EP28566 365 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 NUDT1P36639 197 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 KIR2DS2P43631 304 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 SLC26A5P58743 744 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 AP1B1Q10567 949 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 UNC119Q13432 240 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 CFAP221Q4G0U5 840 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 CCDC40Q4G0X9 1142 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 DNAJC21Q5F1R6 531 aaKnown RBP2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 PAGE3Q5JUK9 113 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 ZNF691Q5VV52 312 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 SCYL2Q6P3W7 929 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 DNM1P46Q6ZS02 220 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 LANCL3Q6ZV70 420 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 SKA3Q8IX90 412 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 ZNF786Q8N393 782 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 MTURNQ8N3F0 131 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 ZSCAN4Q8NAM6 433 aaPredicted RBP2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 ZNF740Q8NDX6 193 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 OR52I1Q8NGK6 324 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 CNIH3Q8TBE1 160 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 MARCH1Q8TCQ1 289 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 NCLNQ969V3 563 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 SLC35E1Q96K37 410 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 NSMCE2Q96MF7 247 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 WRAP53Q9BUR4 548 aaKnown RBP2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 THAP9Q9H5L6 903 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 CYTL1Q9NRR1 136 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 EIF3LQ9Y262 564 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms