RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 A0A0A6YYC8 382 aaPredicted RBP0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 I3L1I5 382 aaPredicted RBP0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 EIF5BO60841 1220 aaKnown RBP0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 SDC3O75056 442 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 SS18L1O75177 396 aaPredicted RBP0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 ZNF780AO75290 641 aaPredicted RBP0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 NPY4RP50391 375 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 EMDP50402 254 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 NLRP11P59045 1033 aaKnown RBP0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 CSNK1G2P78368 415 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 VLDLRP98155 873 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 WASHC5Q12768 1159 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 NPRL3Q12980 569 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 GNMTQ14749 295 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 CFAP58Q5T655 872 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 CWC27Q6UX04 472 aaKnown RBP0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 STAC2Q6ZMT1 411 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 OAFQ86UD1 273 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 VRK2Q86Y07 508 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 ZDHHC21Q8IVQ6 265 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 AQP12AQ8IXF9 295 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 PNKDQ8N490 385 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 Q8NDZ9 215 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 NPBQ8NG41 125 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 OR4F17Q8NGA8 305 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 ZNF461Q8TAF7 563 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 VPS33AQ96AX1 596 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 OR4F4Q96R69 305 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 CALHM2Q9HA72 323 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 TMEM161AQ9NX61 479 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 ZNF391Q9UJN7 358 aa0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 SYNE2Q8WXH0 6885 aaKnown RBP0.41□□□□□ -2.34
RNU6-238P-201ENST00000363313 PDS5BQ9NTI5 1447 aa0.4□□□□□ -2.34
RNU6-238P-201ENST00000363313 A0A1B0GW55 424 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 ZNF705GA8MUZ8 300 aaPredicted RBP0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 J3QRE1 110 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 TM9SF1O15321 606 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 MPZL1O95297 269 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 GLAP06280 429 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 HIST1H2AGP0C0S8 130 aaPredicted RBP0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 DUX4L2P0CJ85 424 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 DUX4L3P0CJ86 424 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 DUX4L5P0CJ88 424 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 DUX4L6P0CJ89 424 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 DUX4L7P0CJ90 424 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 MAGEB1P43366 347 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 GEMP55040 296 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 ADARB1P78563 741 aaKnown RBP0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 ZNF154Q13106 437 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 ATXN7L3Q14CW9 347 aaPredicted RBP0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 PKN2Q16513 984 aaKnown RBP0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 PODNL1Q6PEZ8 512 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 DUX4L9Q6RFH8 374 aaPredicted RBP0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 C6orf89Q6UWU4 347 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 MSANTD1Q6ZTZ1 278 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 GATSQ8NAP1 163 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 RGP1Q92546 391 aaPredicted RBP0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 P3H4Q92791 437 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 HIST1H2ACQ93077 130 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 NAP1L4Q99733 375 aaKnown RBP0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 SLF1Q9BQI6 1058 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 NTMT1Q9BV86 223 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 ACPTQ9BZG2 426 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 CHIAQ9BZP6 476 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 OR11A1Q9GZK7 315 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 PLGRKTQ9HBL7 147 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 AIG1Q9NVV5 245 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 DUX4Q9UBX2 424 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 FOXA2Q9Y261 457 aaPredicted RBP0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 METP08581 1390 aa0.4□□□□□ -2.35
RNU6-238P-201ENST00000363313 BUB1O43683 1085 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 CREB3O43889 395 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 OR10H3O60404 316 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 SFTPBP07988 381 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 CPA3P15088 417 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 GLULP15104 373 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 PSMC3P17980 439 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 SNTB2Q13425 540 aaKnown RBP0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 STXBP2Q15833 593 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 GORABQ5T7V8 394 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 FBXW9Q5XUX1 488 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 HIST2H2AA3Q6FI13 130 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 SLC22A16Q86VW1 577 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 IFNEQ86WN2 208 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 BPIFB2Q8N4F0 458 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 NKAPP1Q8N9T2 125 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 OR9A4Q8NGU2 314 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 MRPL53Q96EL3 112 aaKnown RBP0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 INTS14Q96SY0 518 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 NGBQ9NPG2 151 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 DCAF13Q9NV06 445 aaKnown RBP0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 GALPQ9UBC7 116 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 OR12D3Q9UGF7 316 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 FBXL5Q9UKA1 691 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 EXOSC1Q9Y3B2 195 aaKnown RBP0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 KMT2DO14686 5537 aa0.39□□□□□ -2.35
RNU6-238P-201ENST00000363313 RBMY1BA6NDE4 496 aaKnown RBP0.38□□□□□ -2.35
RNU6-238P-201ENST00000363313 RBMY1EA6NEQ0 496 aaKnown RBP0.38□□□□□ -2.35
RNU6-238P-201ENST00000363313 HELTA6NFD8 242 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms