RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 NHLRC3Q5JS37 347 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 GSG1LQ6UXU4 331 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 APOOLQ6UXV4 268 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 CXXC5Q7LFL8 322 aaKnown RBP11.89□□□□□ -0.51
VAMP1-201ENST00000361716 OR56B4Q8NH76 319 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 SOCS4Q8WXH5 440 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 SLC6A16Q9GZN6 736 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 ZCCHC4Q9H5U6 513 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 CYSLTR2Q9NS75 346 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 CHD5Q8TDI0 1954 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 ABHD14A-ACY1A0A1B0GW23 586 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 RGS9O75916 674 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-201ENST00000361716 C1SP09871 688 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 ACHEP22303 614 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 OPRD1P41143 372 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 TM4SF4P48230 202 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 PXNP49023 591 aaPredicted RBP11.89□□□□□ -0.51
VAMP1-201ENST00000361716 MEOX2P50222 304 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 EPHB3P54753 998 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 RAB40BQ12829 278 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 LYPLAL1Q5VWZ2 237 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 TMUB2Q71RG4 321 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 OR4D11Q8NGI4 311 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 SLC25A13Q9UJS0 675 aa11.89□□□□□ -0.51
VAMP1-201ENST00000361716 PDCD11Q14690 1871 aaKnown RBP11.88□□□□□ -0.51
VAMP1-201ENST00000361716 H7C0S8 307 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 STK25O00506 426 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 NDUFS6O75380 124 aaKnown RBP11.88□□□□□ -0.51
VAMP1-201ENST00000361716 KLHL18O94889 574 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 IGLV3-27P01718 113 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 C12orf73Q69YU5 71 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 MSANTD1Q6ZTZ1 278 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 CPOQ8IVL8 374 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 LINC01599Q8WXQ3 324 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 PLD4Q96BZ4 506 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 OR1F2PQ96R84 312 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 POLDIP3Q9BY77 421 aaKnown RBP11.88□□□□□ -0.51
VAMP1-201ENST00000361716 DNASE2O00115 360 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-201ENST00000361716 PRKRAO75569 313 aaKnown RBP11.88□□□□□ -0.51
VAMP1-201ENST00000361716 INHAP05111 366 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 PRG2P13727 222 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 HBMQ6B0K9 141 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 VASNQ6EMK4 673 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 HSD11B1LQ7Z5J1 315 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 OAFQ86UD1 273 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 FAM26EQ8N5C1 309 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 DCAF4L2Q8NA75 395 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 GPR32P1Q8NGA4 272 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 OR5M1Q8NGP8 315 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 CHTF18Q8WVB6 975 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 FBXO17Q96EF6 278 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 DEFB118Q96PH6 123 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 BBS4Q96RK4 519 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 TEX12Q9BXU0 123 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 TMEM185BQ9H7F4 350 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 ZCCHC3Q9NUD5 404 aaKnown RBP11.88□□□□□ -0.51
VAMP1-201ENST00000361716 ZSCAN32Q9NX65 697 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 PTTG3PQ9NZH4 202 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 ASB4Q9Y574 426 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 OR2W5A6NFC9 320 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 OR5K4A6NMS3 321 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 AIPO00170 330 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 GOSR2O14653 212 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 TXNL1O43396 289 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 PRICKLE3O43900 615 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-201ENST00000361716 ECDO95905 644 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-201ENST00000361716 EOMESO95936 686 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 S100A6P06703 90 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 ELFN1P0C7U0 828 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 CYBAP13498 195 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 LASP1Q14847 261 aaKnown RBP11.88□□□□□ -0.51
VAMP1-201ENST00000361716 OCLNQ16625 522 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 HES5Q5TA89 166 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 SCARB1Q8WTV0 552 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 NOX3Q9HBY0 568 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 WSB2Q9NYS7 404 aaPredicted RBP11.88□□□□□ -0.51
VAMP1-201ENST00000361716 SH2B3Q9UQQ2 575 aa11.88□□□□□ -0.51
VAMP1-201ENST00000361716 SEMA7AO75326 666 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF35P13682 527 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 DRD2P14416 443 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF8P17098 575 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-201ENST00000361716 SYN1P17600 705 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 PYCR1P32322 319 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 SORDQ00796 357 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 CAMK1Q14012 370 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 SERTAD2Q14140 314 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF770Q6IQ21 691 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-201ENST00000361716 BTN2A1Q7KYR7 527 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 BPIFCQ8NFQ6 507 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 THAP4Q8WY91 577 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 ZNF607Q96SK3 696 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 CXorf36Q9H7Y0 433 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 POT1Q9NUX5 634 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 KLK11Q9UBX7 282 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 SIRT4Q9Y6E7 314 aaPredicted RBP11.87□□□□□ -0.51
VAMP1-201ENST00000361716 KCNE1BA0A087WTH5 132 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 UBE2QL1A1L167 161 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 MEIS3P1A6NDR6 274 aa11.87□□□□□ -0.51
VAMP1-201ENST00000361716 CASC3O15234 703 aaKnown RBP11.87□□□□□ -0.51
VAMP1-201ENST00000361716 RNF13O43567 381 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms