RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 ECHS1P30084 290 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 GPC1P35052 558 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 IDUAP35475 653 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 PRKAG1P54619 331 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 ETFDHQ16134 617 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 VPS26BQ4G0F5 336 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 NCMAPQ5T1S8 102 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 PDSS1Q5T2R2 415 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 HMBOX1Q6NT76 420 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 FIGNL1Q6PIW4 674 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 TRIM46Q7Z4K8 759 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 ZAR1Q86SH2 424 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 POC1BQ8TC44 478 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 ACTRT2Q8TDY3 377 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 NEUROG1Q92886 237 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 FBXO34Q9NWN3 711 aa18.81■□□□□ 0.6
CD47-202ENST00000361309 NUP214P35658 2090 aaPredicted RBP18.81■□□□□ 0.6
CD47-202ENST00000361309 GOLGA8RI6L899 631 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 GCM2O75603 506 aaPredicted RBP18.8■□□□□ 0.6
CD47-202ENST00000361309 TP53P04637 393 aaPredicted RBP18.8■□□□□ 0.6
CD47-202ENST00000361309 CD3EP07766 207 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 DANCRP0C864 163 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 ACP2P11117 423 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 CDKN1AP38936 164 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 CARD18P57730 90 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 ANKRD26P1Q6NSI1 321 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 NUFIP2Q7Z417 695 aaKnown RBP18.8■□□□□ 0.6
CD47-202ENST00000361309 TRABD2AQ86V40 505 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 GABRG1Q8N1C3 465 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 CDRT4Q8N9R6 151 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 NUP43Q8NFH3 380 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 CEP70Q8NHQ1 597 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 FBXO30Q8TB52 745 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 ABHD3Q8WU67 409 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 ANP32BQ92688 251 aaKnown RBP18.8■□□□□ 0.6
CD47-202ENST00000361309 GTPBP3Q969Y2 492 aaKnown RBP18.8■□□□□ 0.6
CD47-202ENST00000361309 CIDECQ96AQ7 238 aaPredicted RBP18.8■□□□□ 0.6
CD47-202ENST00000361309 KLHL15Q96M94 604 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 HDHD5Q9BXW7 423 aa18.8■□□□□ 0.6
CD47-202ENST00000361309 MAGED1Q9Y5V3 778 aaPredicted RBP18.8■□□□□ 0.6
CD47-202ENST00000361309 YLPM1P49750 1951 aaKnown RBP18.8■□□□□ 0.6
CD47-202ENST00000361309 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 PDPK1O15530 556 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 RSL1D1O76021 490 aaKnown RBP18.79■□□□□ 0.6
CD47-202ENST00000361309 KCNK2O95069 426 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 SHC1P29353 583 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 SFTPDP35247 375 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 ACVR1BP36896 505 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 ZNF239Q16600 458 aaKnown RBP18.79■□□□□ 0.6
CD47-202ENST00000361309 TMEM201Q5SNT2 666 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 SFRP5Q5T4F7 317 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 TFAP2EQ6VUC0 442 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 SZRD1Q7Z422 152 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 LILRA2Q8N149 483 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 ZNF619Q8N2I2 560 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 FAM110BQ8TC76 370 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 RNF128Q8TEB7 428 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 SMAP2Q8WU79 429 aaPredicted RBP18.79■□□□□ 0.6
CD47-202ENST00000361309 GIMAP5Q96F15 307 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 SLCO5A1Q9H2Y9 848 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 ESRP2Q9H6T0 727 aaKnown RBP18.79■□□□□ 0.6
CD47-202ENST00000361309 LIPT1Q9Y234 373 aa18.79■□□□□ 0.6
CD47-202ENST00000361309 RNF212BA8MTL3 300 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 CRCPO75575 148 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 PABPC4LP0CB38 370 aaKnown RBP18.78■□□□□ 0.6
CD47-202ENST00000361309 HPGDP15428 266 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 IL32P24001 234 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 TAB1Q15750 504 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 ZNF672Q499Z4 452 aaPredicted RBP18.78■□□□□ 0.6
CD47-202ENST00000361309 ZNF385BQ569K4 471 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 ATG4DQ86TL0 474 aaPredicted RBP18.78■□□□□ 0.6
CD47-202ENST00000361309 MISPQ8IVT2 679 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 TUSC5Q8IXB3 177 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 SLC16A11Q8NCK7 471 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 OR6Y1Q8NGX8 325 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 B4GALNT2Q8NHY0 566 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 REXO5Q96IC2 774 aaKnown RBP18.78■□□□□ 0.6
CD47-202ENST00000361309 SRXN1Q9BYN0 137 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 TNFRSF12AQ9NP84 129 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 NGBQ9NPG2 151 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 RRAGDQ9NQL2 400 aaPredicted RBP18.78■□□□□ 0.6
CD47-202ENST00000361309 UBQLN4Q9NRR5 601 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 PLCE1Q9P212 2302 aa18.78■□□□□ 0.6
CD47-202ENST00000361309 SCDO00767 359 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 SEC22BO75396 215 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 GSTA1P08263 222 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 LINGO3P0C6S8 592 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 PRIM2P49643 509 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 FAPQ12884 760 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 KIAA0040Q15053 153 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 RNPS1Q15287 305 aaKnown RBP18.77■□□□□ 0.6
CD47-202ENST00000361309 CD226Q15762 336 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 DUSP5Q16690 384 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 NOA1Q8NC60 698 aaKnown RBP18.77■□□□□ 0.6
CD47-202ENST00000361309 KBTBD8Q8NFY9 601 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 ZFP28Q8NHY6 868 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 HSD17B8Q92506 261 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 OTUB1Q96FW1 271 aaPredicted RBP18.77■□□□□ 0.6
CD47-202ENST00000361309 C16orf58Q96GQ5 468 aa18.77■□□□□ 0.6
CD47-202ENST00000361309 MS4A4EQ96PG1 132 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms