RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 MARCH9Q86YJ5 346 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 ACOT4Q8N9L9 421 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 ACOT12Q8WYK0 555 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 OTUB1Q96FW1 271 aaPredicted RBP11.56□□□□□ -0.56
UBA3-202ENST00000361055 WDR92Q96MX6 357 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 OR7D2Q96RA2 312 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 MARVELD1Q9BSK0 173 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 PRR14Q9BWN1 585 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 NIPAL2Q9H841 368 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 PLSCR3Q9NRY6 295 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 GIMAP4Q9NUV9 329 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 KLHL28Q9NXS3 571 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 NLGN3Q9NZ94 848 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 ATG4BQ9Y4P1 393 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 MAU2Q9Y6X3 613 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 LRP4O75096 1905 aa11.56□□□□□ -0.56
UBA3-202ENST00000361055 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 SGK494L7N484 410 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 GABRPO00591 440 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 KLF4O43474 513 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 AHRP35869 848 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 CD79BP40259 229 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 RAB28P51157 221 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 CD83Q01151 205 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 BDH1Q02338 343 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 DMPKQ09013 629 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 CLPPQ16740 277 aaPredicted RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 TATDN3Q17R31 274 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 SLC48A1Q6P1K1 146 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 HMGN2P46Q86SG4 172 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 MEX3DQ86XN8 651 aaKnown RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 TMEFF1Q8IYR6 380 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 SRFBP1Q8NEF9 429 aaKnown RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 NUP43Q8NFH3 380 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 OR13H1Q8NG92 308 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 OR4Q3Q8NH05 313 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 NEIL3Q8TAT5 605 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 ZG16BQ96DA0 208 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 ELP4Q96EB1 424 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 SCARF2Q96GP6 870 aaPredicted RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 SENP5Q96HI0 755 aaPredicted RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 FAM46AQ96IP4 442 aaKnown RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 INSM2Q96T92 566 aaPredicted RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 HDHD5Q9BXW7 423 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 TRIM45Q9H8W5 580 aaPredicted RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 ACOXLQ9NUZ1 547 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 CNIH4Q9P003 139 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 H2AFY2Q9P0M6 372 aaPredicted RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 ENTPD4Q9Y227 616 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 GPR55Q9Y2T6 319 aaPredicted RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 USP34Q70CQ2 3546 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 BDP1A6H8Y1 2624 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 FAM240BA0A1B0GVZ2 78 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 PRSS38A1L453 326 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 SMIM30A4D0T7 59 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 GSAPA4D1B5 854 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 OR6C70A6NIJ9 312 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 CPSF4LA6NMK7 179 aaKnown RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 TNFRSF10CO14798 259 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 LYRM1O43325 122 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 SLC43A1O75387 559 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 GNSP15586 552 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 CELP19835 753 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 AVPR2P30518 371 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 BCL6P41182 706 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 TSFMP43897 325 aaKnown RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 GZMKP49863 264 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 CLDN20P56880 219 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 ABATP80404 500 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 FAPQ12884 760 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 CEBPEQ15744 281 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 Q5BKY6 102 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 ENPP7Q6UWV6 458 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 TRILQ7L0X0 811 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 SHFQ7M4L6 423 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 NANOGNBQ7Z5D8 188 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 VRK2Q86Y07 508 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 PLCZ1Q86YW0 608 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 UBE2J2Q8N2K1 259 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 ZFP41Q8N8Y5 198 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 OR2L5Q8NG80 312 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 OR4F15Q8NGB8 312 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 OR2L8Q8NGY9 312 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 ZFAND1Q8TCF1 268 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 DNASE2BQ8WZ79 361 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 SARGQ9BW04 601 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 RAB11FIP5Q9BXF6 653 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 QRSL1Q9H0R6 528 aaKnown RBP11.55□□□□□ -0.56
UBA3-202ENST00000361055 FGF22Q9HCT0 170 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 GPR27Q9NS67 375 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 MOSPD1Q9UJG1 213 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 CHST2Q9Y4C5 530 aa11.55□□□□□ -0.56
UBA3-202ENST00000361055 ZDBF2Q9HCK1 2354 aa11.54□□□□□ -0.56
UBA3-202ENST00000361055 ERI3O43414 337 aaKnown RBP11.54□□□□□ -0.56
UBA3-202ENST00000361055 PRKRAO75569 313 aaKnown RBP11.54□□□□□ -0.56
UBA3-202ENST00000361055 OR5F1O95221 314 aa11.54□□□□□ -0.56
UBA3-202ENST00000361055 THEGLP0DJG4 465 aa11.54□□□□□ -0.56
UBA3-202ENST00000361055 PSKH1P11801 424 aa11.54□□□□□ -0.56
UBA3-202ENST00000361055 F3P13726 295 aa11.54□□□□□ -0.56
UBA3-202ENST00000361055 TRHRP34981 398 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms