RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 UGT2A1Q9Y4X1 527 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 EMC8O43402 210 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 JRKO75564 520 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 C6orf136Q5SQH8 315 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 NCBP2-AS2Q69YL0 99 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 FAM180BQ6P0A1 224 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 PXT1Q8NFP0 134 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 C10orf90Q96M02 699 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 C11orf49Q9H6J7 331 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 GPR52Q9Y2T5 361 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 GLOD5A6NK44 160 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 J3QR89 54 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 LRIT3Q3SXY7 679 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 DNAJC5GQ8N7S2 189 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 Q8N9G6 341 aaPredicted RBP12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 OR5D16Q8NGK9 328 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 RPL10LQ96L21 214 aaKnown RBP12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 ARHGAP39Q9C0H5 1083 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 SMOC2Q9H3U7 446 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 METTL17Q9H7H0 456 aaPredicted RBP12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 NT5DC2Q9H857 520 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 NOX3Q9HBY0 568 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 HEMK1Q9Y5R4 338 aaPredicted RBP12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 C1orf226A1L170 272 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 ZNF780AO75290 641 aaPredicted RBP12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 IL1R2P27930 398 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 HYAL2Q12891 473 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 LCN8Q6JVE9 175 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 CCDC74AQ96AQ1 378 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 RNF170Q96K19 258 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 MRPS14O60783 128 aaKnown RBP12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 RD3LP0DJH9 198 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 OR4D2P58180 307 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 GLO1Q04760 184 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 DUSP6Q16828 381 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 LACC1Q8IV20 430 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 SPARTQ8N0X7 666 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 ZNF321PQ8N8H1 164 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 PCNPQ8WW12 178 aaKnown RBP12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 FCRL1Q96LA6 429 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 PBX4Q9BYU1 374 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 PURGQ9UJV8 347 aaKnown RBP12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 MEIS3P1A6NDR6 274 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 HLA-AP01891 365 aaKnown RBP12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 UBE2G2P60604 165 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 SLC10A1Q14973 349 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 OR5W2Q8NH69 310 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 LINC01599Q8WXQ3 324 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 RBMXL1Q96E39 390 aaKnown RBP12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 HAO2Q9NYQ3 351 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 RPS5P46782 204 aaKnown RBP12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 PXDC1Q5TGL8 231 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 ETFRF1Q6IPR1 90 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 ASPGQ86U10 573 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 CLEC1AQ8NC01 280 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 SGCZQ96LD1 299 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 SNX18Q96RF0 628 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 C12orf57Q99622 126 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 HSD3B7Q9H2F3 369 aa12.51□□□□□ -0.41
SRGAP3-201ENST00000360413 LDB2O43679 373 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 ZNF217O75362 1048 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 POP7O75817 140 aaKnown RBP12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 NAT1P18440 290 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 SNU13P55769 128 aaKnown RBP12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 RAB11AP62491 216 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 MEF2AQ02078 507 aaPredicted RBP12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 GRB7Q14451 532 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 FAM74A1Q5RGS3 127 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 SSX7Q7RTT5 188 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 C1orf127Q8N9H9 656 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 C2CD4CQ8TF44 421 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 ZNF587Q96SQ5 575 aaPredicted RBP12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 OR51B5Q9H339 312 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 GABARAPH6UMI1 98 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 NFKBIEO00221 500 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 GABARAPO95166 117 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 GLB1P16278 677 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 HBG1P69891 147 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 HBG2P69892 147 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 FAM58AQ8N1B3 248 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 STEAP2Q8NFT2 490 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 CLEC4CQ8WTT0 213 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 SMAP2Q8WU79 429 aaPredicted RBP12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 C14orf79Q96F83 325 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 OR10A5Q9H207 317 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 OR10A2Q9H208 303 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 NSUN3Q9H649 340 aaKnown RBP12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 IFT172Q9UG01 1749 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 WASH4PA8MWX3 477 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 C17orf112F2Z3M2 114 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 P2RX1P51575 399 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 ELAVL3Q14576 367 aaKnown RBP12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 UPP1Q16831 310 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 ZNF791Q3KP31 576 aaPredicted RBP12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 UEVLDQ8IX04 471 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 SEMA6DQ8NFY4 1073 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 UCN3Q969E3 161 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 CMSS1Q9BQ75 279 aaKnown RBP12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 RNF24Q9Y225 148 aa12.5□□□□□ -0.41
SRGAP3-201ENST00000360413 SLC45A1Q9Y2W3 748 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms