RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 IL18R1Q13478 541 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 DGCR6Q14129 220 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 ARHGEF6Q15052 776 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 LTB4RQ15722 352 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 ZNF79Q15937 498 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 BTBD16Q32M84 506 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 SOWAHCQ53LP3 525 aaPredicted RBP2.13□□□□□ -2.07
VPS54-202ENST00000354504 CT45A2Q5DJT8 189 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 CEP78Q5JTW2 689 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 RBM48Q5RL73 367 aaKnown RBP2.13□□□□□ -2.07
VPS54-202ENST00000354504 AADACL4Q5VUY2 407 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 OR2T5Q6IEZ7 315 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 APOOLQ6UXV4 268 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 Q6ZRM9 215 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 TMEM26Q6ZUK4 368 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 GET4Q7L5D6 327 aaPredicted RBP2.13□□□□□ -2.07
VPS54-202ENST00000354504 SLC46A3Q7Z3Q1 461 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 HORMAD1Q86X24 394 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 RNF130Q86XS8 419 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 CA13Q8N1Q1 262 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 CLIP4Q8N3C7 705 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 SPEM1Q8N4L4 309 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 RFLNBQ8N5W9 214 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 SLC5A8Q8N695 610 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 Q8NA96 180 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 PCYOX1LQ8NBM8 494 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 IL17RDQ8NFM7 739 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 OR5D16Q8NGK9 328 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 OR2T29Q8NH02 315 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 OR4Q3Q8NH05 313 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 NDNFQ8TB73 568 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 SFXN5Q8TD22 340 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 ZNF675Q8TD23 568 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 SELENOMQ8WWX9 145 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 OR8D1Q8WZ84 308 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 ELP4Q96EB1 424 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 C16orf58Q96GQ5 468 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 VSTM2LQ96N03 204 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 PRPF18Q99633 342 aaKnown RBP2.13□□□□□ -2.07
VPS54-202ENST00000354504 NPAS1Q99742 590 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 FUNDC2Q9BWH2 189 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 HCAR1Q9BXC0 346 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 NMNAT2Q9BZQ4 307 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 MIXL1Q9H2W2 232 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 SH2D2AQ9NP31 389 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 SARS2Q9NP81 518 aaKnown RBP2.13□□□□□ -2.07
VPS54-202ENST00000354504 PRMT8Q9NR22 394 aaPredicted RBP2.13□□□□□ -2.07
VPS54-202ENST00000354504 SEMA4GQ9NTN9 838 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 TAS2R16Q9NYV7 291 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 TAS2R9Q9NYW1 312 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 WWOXQ9NZC7 414 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 ADA2Q9NZK5 511 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 ERVK-18Q9QC07 812 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 HS3ST3A1Q9Y663 406 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 ZDBF2Q9HCK1 2354 aa2.13□□□□□ -2.07
VPS54-202ENST00000354504 RAI1Q7Z5J4 1906 aaPredicted RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 A0A1W2PQ72 361 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 C4orf47A7E2U8 309 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 E5RI56 91 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 NPIPB6E9PJ23 425 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 QSOX1O00391 747 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 SLC9A3R1O14745 358 aaPredicted RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 KMOO15229 486 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 KIAA0513O60268 411 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 CDC14BO60729 498 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 PAK4O96013 591 aaPredicted RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 PTHP01270 115 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 PCCBP05166 539 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 EZRP15311 586 aaKnown RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 UGT2B7P16662 529 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 CYP2A7P20853 494 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 HIST1H1TP22492 207 aaPredicted RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 UQCRC2P22695 453 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 CERS1P27544 350 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 C21orf33P30042 268 aaPredicted RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 MAP2K4P45985 399 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 FASLGP48023 281 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 HSPA13P48723 471 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 RAB28P51157 221 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 P2RY4P51582 365 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 NR1H2P55055 460 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 TMBIM6P55061 237 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 CASP9P55211 416 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 KCNK10P57789 538 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 RPS3AP61247 264 aaKnown RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 RPS21P63220 83 aaKnown RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 HPCAP84074 193 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 ROR2Q01974 943 aaKnown RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 CSTF1Q05048 431 aaKnown RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 ILKQ13418 452 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 GPR18Q14330 331 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 DAZAP2Q15038 168 aaPredicted RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 EXOC3L2Q2M3D2 409 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 ARHGAP11BQ3KRB8 267 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 LEXMQ3ZCV2 418 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 MMEL1Q495T6 779 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 CD300EQ496F6 205 aaPredicted RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 GLYR1Q49A26 553 aaPredicted RBP2.12□□□□□ -2.07
VPS54-202ENST00000354504 PLA1AQ53H76 456 aa2.12□□□□□ -2.07
VPS54-202ENST00000354504 CCNYL2Q5T2Q4 361 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms