RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 NPIPA8P0DM63 369 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 MAOAP21397 527 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 S1PR1P21453 382 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CD1CP29017 333 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 HOXA6P31267 233 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 GABRA3P34903 492 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 KRT20P35900 424 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ESRRGP62508 458 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 STX4Q12846 297 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF155Q12901 538 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 MAPK14Q16539 360 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 INAVAQ3KP66 663 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 TCTE1Q5JU00 501 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 DCST2Q5T1A1 773 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 GARNL3Q5VVW2 1013 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 PGBD2Q6P3X8 592 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF836Q6ZNA1 936 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 COX18Q8N8Q8 333 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CDRT4Q8N9R6 151 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 OR6C4Q8NGE1 309 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 OR51Q1Q8NH59 317 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 SUN5Q8TC36 379 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 GPR151Q8TDV0 419 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF566Q969W8 418 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 RNF31Q96EP0 1072 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 PRRC1Q96M27 445 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CD180Q99467 661 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 IER2Q9BTL4 223 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CENPOQ9BU64 300 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ALOXE3Q9BYJ1 711 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CHRNA10Q9GZZ6 450 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 MTHFD2LQ9H903 347 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CXorf21Q9HAI6 301 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 PRTFDC1Q9NRG1 225 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ERVK-18Q9QC07 812 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 SLC13A4Q9UKG4 626 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF443Q9Y2A4 671 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 NOX1Q9Y5S8 564 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ADAMTS20P59510 1910 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CCDC163A0A0D9SF12 145 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 A0A1W2PRQ8 180 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CPSF4LA6NMK7 179 aaKnown RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 H3BMH7 237 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 OR2B3O76000 313 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CPNE6O95741 557 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 FOLR1P15328 257 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CHMP24386 653 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 POU1F1P28069 291 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 PRKAR1BP31321 381 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 SSTR4P31391 388 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 TRHRP34981 398 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 MAP3K8P41279 467 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 OR1D4P47884 311 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 IDH2P48735 452 aaKnown RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ARRB1P49407 418 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 NUP107P57740 925 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 TAS2R41P59536 307 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 SKP1P63208 163 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 HSD11B2P80365 405 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 MAP4K2Q12851 820 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 DGCR6Q14129 220 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 PTGES3Q15185 160 aaKnown RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 DHRS4L2Q6PKH6 230 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 TTLL10Q6ZVT0 673 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 WDR5BQ86VZ2 330 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 MEX3DQ86XN8 651 aaKnown RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CLVS1Q8IUQ0 354 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CCDC103Q8IW40 242 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF595Q8IYB9 648 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 MAML2Q8IZL2 1156 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 PARP8Q8N3A8 854 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 RIT1Q92963 219 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 COX4I2Q96KJ9 171 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 NUDT22Q9BRQ3 303 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 UCK2Q9BZX2 261 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF350Q9GZX5 532 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 LIN28AQ9H9Z2 209 aaKnown RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 PRMT8Q9NR22 394 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF226Q9NYT6 803 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 FTSJ1Q9UET6 329 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 SUSD2Q9UGT4 822 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 RSL24D1Q9UHA3 163 aaKnown RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 KCNE5Q9UJ90 142 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 PILRBQ9UKJ0 227 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 PEX12O00623 359 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 FAM20BO75063 409 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 SLITRK5O94991 958 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 SOX14O95416 240 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 ADAP00813 363 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 GNSP15586 552 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF12P17014 697 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 EPHA8P29322 1005 aaPredicted RBP8.55□□□□□ -1.04
ATG4A-202ENST00000345734 GPR3P46089 330 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 CRISP1P54107 249 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 SMIM11AP58511 58 aa8.55□□□□□ -1.04
ATG4A-202ENST00000345734 IGLV3-21P80748 117 aaPredicted RBP8.55□□□□□ -1.04
ATG4A-202ENST00000345734 CSTF1Q05048 431 aaKnown RBP8.55□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF267Q14586 743 aaPredicted RBP8.55□□□□□ -1.04
ATG4A-202ENST00000345734 GRM7Q14831 915 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms