RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 NCOA6Q14686 2063 aaPredicted RBP12.62□□□□□ -0.39
TPM4-202ENST00000344824 NBPF19A0A087WUL8 3843 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 PRAMEF27A3QJZ7 478 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 DUXAA6NLW8 204 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 PRRG2O14669 202 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 BMP2P12643 396 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 GGT1P19440 569 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 PCGF2P35227 344 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 PTGS2P35354 604 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 KRT20P35900 424 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 RPP38P78345 283 aaKnown RBP12.62□□□□□ -0.39
TPM4-202ENST00000344824 DMTNQ08495 405 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 FUT5Q11128 374 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 ZNF630Q2M218 657 aaPredicted RBP12.62□□□□□ -0.39
TPM4-202ENST00000344824 LRRC23Q53EV4 343 aaPredicted RBP12.62□□□□□ -0.39
TPM4-202ENST00000344824 ZCCHC12Q6PEW1 402 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 FIGNL1Q6PIW4 674 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 NPSR1Q6W5P4 371 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 NCCRP1Q6ZVX7 275 aaPredicted RBP12.62□□□□□ -0.39
TPM4-202ENST00000344824 SPPL2CQ8IUH8 684 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 OR4N2Q8NGD1 307 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 SLC38A5Q8WUX1 472 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 RMND5BQ96G75 393 aaPredicted RBP12.62□□□□□ -0.39
TPM4-202ENST00000344824 CCDC120Q96HB5 630 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 LMF2Q9BU23 707 aaKnown RBP12.62□□□□□ -0.39
TPM4-202ENST00000344824 PIGUQ9H490 435 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 DENND2DQ9H6A0 471 aaPredicted RBP12.62□□□□□ -0.39
TPM4-202ENST00000344824 TMEM38AQ9H6F2 299 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 A4GALTQ9NPC4 353 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 EXD2Q9NVH0 621 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 KLRF1Q9NZS2 232 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 CNIH4Q9P003 139 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 PLEKHB1Q9UF11 243 aaPredicted RBP12.62□□□□□ -0.39
TPM4-202ENST00000344824 MAGEL2Q9UJ55 1249 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 CNOT11Q9UKZ1 510 aaKnown RBP12.62□□□□□ -0.39
TPM4-202ENST00000344824 OR10H1Q9Y4A9 318 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 V9GYQ6 96 aa12.62□□□□□ -0.39
TPM4-202ENST00000344824 PHF3Q92576 2039 aaKnown RBP12.61□□□□□ -0.39
TPM4-202ENST00000344824 ARHGAP21Q5T5U3 1957 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 ACOT8O14734 319 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 GNB5O14775 395 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 REM1O75628 298 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 PPM1BO75688 479 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 CHRM4P08173 479 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 CELA3AP09093 270 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 GDF1P27539 372 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 IL12BP29460 328 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 DCAF7P61962 342 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 POU6F2P78424 691 aaPredicted RBP12.61□□□□□ -0.39
TPM4-202ENST00000344824 HPCAP84074 193 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 PSG6Q00889 435 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 RBBP4Q09028 425 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 TRAP1Q12931 704 aaKnown RBP12.61□□□□□ -0.39
TPM4-202ENST00000344824 TOMM20Q15388 145 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.61□□□□□ -0.396e-7■■■□□ 19.1
TPM4-202ENST00000344824 DESI1Q6ICB0 168 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 HMGN2P46Q86SG4 172 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 SPATA24Q86W54 205 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 SLC34A3Q8N130 599 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 FAM109AQ8N4B1 249 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 C17orf47Q8NEP4 570 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 TMBIM1Q969X1 311 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 HSPBAP1Q96EW2 488 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 NSMCE2Q96MF7 247 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 PSMG3-AS1Q96PY0 264 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 STACQ99469 402 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 TRIM15Q9C019 465 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 Q9N2J8 555 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 THUMPD1Q9NXG2 353 aaKnown RBP12.61□□□□□ -0.39
TPM4-202ENST00000344824 GIN1Q9NXP7 522 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 ACTR3BQ9P1U1 418 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 B4GALT7Q9UBV7 327 aa12.61□□□□□ -0.39
TPM4-202ENST00000344824 MED12Q93074 2177 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 FRG2CA6NGY1 282 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 NPIPA2E9PIF3 369 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 NPIPA3F8WFD2 350 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 ACOX3O15254 700 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 NKX2-2O95096 273 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 H6PDO95479 791 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 AGR2O95994 175 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 OPN1SWP03999 348 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 TFPTP0C1Z6 253 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 CT45A8P0DMV1 189 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 CT45A9P0DMV2 189 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 GP1BBP13224 206 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 MAGEA8P43361 318 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 PPICP45877 212 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 TXNL4AP83876 142 aaKnown RBP12.6□□□□□ -0.39
TPM4-202ENST00000344824 CCNIQ14094 377 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 MAPK11Q15759 364 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 CT45A2Q5DJT8 189 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 TBCELQ5QJ74 424 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 EXOSC6Q5RKV6 272 aaKnown RBP12.6□□□□□ -0.39
TPM4-202ENST00000344824 DCST2Q5T1A1 773 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 REEP3Q6NUK4 255 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 ARHGAP11AQ6P4F7 1023 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 SPPL2AQ8TCT8 520 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 RSRC1Q96IZ7 334 aaKnown RBP12.6□□□□□ -0.39
TPM4-202ENST00000344824 BTBD2Q9BX70 525 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 OSBPL11Q9BXB4 747 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms