RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ZNF792Q3KQV3 632 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 CATSPEREQ5SY80 951 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 HMGB4Q8WW32 186 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 IL17FQ96PD4 163 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 OR7A17O14581 309 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 PIPP12273 146 aaPredicted RBP17.03■□□□□ 0.32
SMC4-201ENST00000344722 SLC6A19Q695T7 634 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 SFXN4Q6P4A7 337 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 ZNF283Q8N7M2 679 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 SFXN5Q8TD22 340 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 MSLNLQ96KJ4 702 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 HRH4Q9H3N8 390 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 PLCXD1Q9NUJ7 323 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 HSFX1Q9UBD0 423 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 SNX11Q9Y5W9 270 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 GGT3PA6NGU5 568 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 FADS1O60427 444 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 RDH16O75452 317 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 SLC34A2O95436 690 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 TP53P04637 393 aaPredicted RBP17.02■□□□□ 0.32
SMC4-201ENST00000344722 ADH5P11766 374 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 ARL6IP1Q15041 203 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 TMEM239Q8WW34 195 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 PARPBPQ9NWS1 579 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 ATG4BQ9Y4P1 393 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 C5P01031 1676 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 HSD11B2P80365 405 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 AQP6Q13520 282 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 SIGIRRQ6IA17 410 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 CRTC1Q6UUV9 634 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 FAM122BQ7Z309 247 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 SIAH3Q8IW03 269 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 MCEMP1Q8IX19 187 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 NRSN1Q8IZ57 195 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 LRRC46Q96FV0 321 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 SLC38A3Q99624 504 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 RBM38Q9H0Z9 239 aaKnown RBP17.02■□□□□ 0.32
SMC4-201ENST00000344722 LRFN1Q9P244 771 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 NDRG4Q9ULP0 352 aaKnown RBP17.02■□□□□ 0.32
SMC4-201ENST00000344722 A8MUA0 341 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 GPR39O43194 453 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 RAF1P04049 648 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 RAB6AP20340 208 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 PIP5KL1Q5T9C9 394 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 CELF5Q8N6W0 485 aaKnown RBP17.02■□□□□ 0.32
SMC4-201ENST00000344722 CYB561A3Q8NBI2 242 aa17.02■□□□□ 0.32
SMC4-201ENST00000344722 TCRBV5S2A0A599 114 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 CLEC2LP0C7M8 214 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 PRPS1P60891 318 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 FCRLBQ6BAA4 426 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 SUMF2Q8NBJ7 301 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 HERVK_113Q902F9 699 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 DPH7Q9BTV6 452 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 C1GALT1Q9NS00 363 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 EDN1P05305 212 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 SNRPGP62308 76 aaKnown RBP17.02■□□□□ 0.31
SMC4-201ENST00000344722 TEKQ02763 1124 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 HENMT1Q5T8I9 393 aaKnown RBP17.02■□□□□ 0.31
SMC4-201ENST00000344722 SMARCD2Q92925 531 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 RNF208Q9H0X6 261 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 CAMK2AQ9UQM7 478 aa17.02■□□□□ 0.31
SMC4-201ENST00000344722 COL2A1P02458 1487 aaPredicted RBP17.01■□□□□ 0.31
SMC4-201ENST00000344722 ZNF850A8MQ14 1090 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 TGM4P49221 684 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 TSPAN31Q12999 210 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 ZER1Q7Z7L7 766 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 PLA2G15Q8NCC3 412 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 PNPLA2Q96AD5 504 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 ZNF226Q9NYT6 803 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 LAMB4A4D0S4 1761 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 B4GALT2O60909 372 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 STC2O76061 302 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 HRGP04196 525 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 ATXN1LP0C7T5 689 aaKnown RBP17.01■□□□□ 0.31
SMC4-201ENST00000344722 IDH3GP51553 393 aaPredicted RBP17.01■□□□□ 0.31
SMC4-201ENST00000344722 SP3Q02447 781 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 ZNF461Q8TAF7 563 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 AUTS2Q8WXX7 1259 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 DCLRE1CQ96SD1 692 aaKnown RBP17.01■□□□□ 0.31
SMC4-201ENST00000344722 C20orf85Q9H1P6 137 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 MAFFQ9ULX9 164 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 LSM5Q9Y4Y9 91 aaKnown RBP17.01■□□□□ 0.31
SMC4-201ENST00000344722 HRH3Q9Y5N1 445 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 GAAP10253 952 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 P2RX3P56373 397 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 C18orf63Q68DL7 685 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 DLEU7Q6UYE1 221 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 TRIM46Q7Z4K8 759 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 RASGRP3Q8IV61 690 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 ARRDC2Q8TBH0 407 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 KLHL15Q96M94 604 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 SYT3Q9BQG1 590 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 OR52D1Q9H346 318 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 ERVMER34-1Q9H9K5 563 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 IQCF3P0C7M6 154 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 IL1RNP18510 177 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 TGM1P22735 817 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 PRSS58Q8IYP2 241 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 IL17RDQ8NFM7 739 aa17.01■□□□□ 0.31
SMC4-201ENST00000344722 TM9SF4Q92544 642 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms