RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ESRRGP62508 458 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 RAB39AQ14964 217 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 CD226Q15762 336 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 ZNF141Q15928 474 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 EIPR1Q53HC9 387 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 CCDC157Q569K6 752 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 ACSM5Q6NUN0 579 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 P3H2Q8IVL5 708 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 PLPP5Q8NEB5 264 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 IL4I1Q96RQ9 567 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 TRIM45Q9H8W5 580 aaPredicted RBP12.51□□□□□ -0.41
CDC42-202ENST00000344548 SELENONQ9NZV5 590 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 PRODH2Q9UF12 536 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 IL20RAQ9UHF4 553 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 CELSR3Q9NYQ7 3312 aa12.51□□□□□ -0.41
CDC42-202ENST00000344548 ZNF354AO60765 605 aaPredicted RBP12.5□□□□□ -0.41
CDC42-202ENST00000344548 ABCB7O75027 752 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 OR5F1O95221 314 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 ITIH1P19827 911 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 PCMT1P22061 227 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 CSTF2P33240 577 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDC42-202ENST00000344548 GRK6P43250 576 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 MAP2K4P45985 399 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 MASP1P48740 699 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 RPS6KA3P51812 740 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 NUP107P57740 925 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 DCDP81605 110 aaKnown RBP12.5□□□□□ -0.41
CDC42-202ENST00000344548 FGFBP1Q14512 234 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 CACTIN-AS1Q8N1I8 211 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 POGLUT1Q8NBL1 392 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 PFN4Q8NHR9 129 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 GRHL3Q8TE85 626 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 ACOT11Q8WXI4 607 aaPredicted RBP12.5□□□□□ -0.41
CDC42-202ENST00000344548 NMD3Q96D46 503 aaKnown RBP12.5□□□□□ -0.41
CDC42-202ENST00000344548 SLC46A1Q96NT5 459 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 SPSB2Q99619 263 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 CCDC90BQ9GZT6 254 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 NAA50Q9GZZ1 169 aaKnown RBP12.5□□□□□ -0.41
CDC42-202ENST00000344548 CXorf56Q9H5V9 222 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 ATP13A2Q9NQ11 1180 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 KMT2EQ8IZD2 1858 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 SMIM31A0A1B0GVY4 71 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 MEN1O00255 615 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 KLF4O43474 513 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 DUSP3P51452 185 aaPredicted RBP12.5□□□□□ -0.41
CDC42-202ENST00000344548 DBPQ10586 325 aaPredicted RBP12.5□□□□□ -0.41
CDC42-202ENST00000344548 BIKQ13323 160 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 DECR1Q16698 335 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 BROXQ5VW32 411 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 CBLN3Q6UW01 205 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 CD300LDQ6UXZ3 194 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 AHSA2Q719I0 299 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 OVCH1Q7RTY7 1134 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 ZNF540Q8NDQ6 660 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 RNF217Q8TC41 542 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 C8orf44Q96CB5 159 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 NODALQ96S42 347 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 ADOQ96SZ5 270 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 LHPPQ9H008 270 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 CACYBPQ9HB71 228 aaKnown RBP12.5□□□□□ -0.41
CDC42-202ENST00000344548 PCDHGA10Q9Y5H3 936 aa12.5□□□□□ -0.41
CDC42-202ENST00000344548 C2orf92A0A1B0GVN3 265 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 TRAPPC13A5PLN9 417 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 KPNA4O00629 521 aaPredicted RBP12.49□□□□□ -0.41
CDC42-202ENST00000344548 POLR1CO15160 346 aaPredicted RBP12.49□□□□□ -0.41
CDC42-202ENST00000344548 FAM20BO75063 409 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 NGFRP08138 427 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 FGF5P12034 268 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 CD59P13987 128 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 ACP1P24666 158 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 C21orf33P30042 268 aaPredicted RBP12.49□□□□□ -0.41
CDC42-202ENST00000344548 NR0B1P51843 470 aaKnown RBP12.49□□□□□ -0.41
CDC42-202ENST00000344548 CXCR4P61073 352 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 EMX1Q04741 257 aaPredicted RBP12.49□□□□□ -0.41
CDC42-202ENST00000344548 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.49□□□□□ -0.41
CDC42-202ENST00000344548 KLHL26Q53HC5 615 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 SLX4IPQ5VYV7 408 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 GTF2IRD2BQ6EKJ0 949 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 ANKRD37Q7Z713 158 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 GTF2IRD2Q86UP8 949 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 RANBP3LQ86VV4 465 aaPredicted RBP12.49□□□□□ -0.41
CDC42-202ENST00000344548 OR1N1Q8NGS0 311 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 DGCR14Q96DF8 476 aaKnown RBP12.49□□□□□ -0.41
CDC42-202ENST00000344548 LCORQ96JN0 433 aaPredicted RBP12.49□□□□□ -0.41
CDC42-202ENST00000344548 SIGLEC11Q96RL6 698 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 G6PC3Q9BUM1 346 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 ENKD1Q9H0I2 346 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 MEPEQ9NQ76 525 aaPredicted RBP12.49□□□□□ -0.41
CDC42-202ENST00000344548 ZNF318Q5VUA4 2279 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 CCDC160A6NGH7 325 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 SERINC4A6NH21 518 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 VSTM2BA6NLU5 285 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 INMTO95050 263 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 MT-ND2P03891 347 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 MAKP20794 623 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 PCSK6P29122 969 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 GIPRP48546 466 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 GABARAPL2P60520 117 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 OCA2Q04671 838 aa12.49□□□□□ -0.41
CDC42-202ENST00000344548 CLEC12AQ5QGZ9 265 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms