RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 GPER1Q99527 375 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 RAD9AQ99638 391 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 EGLN3Q9H6Z9 239 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 PLCXD1Q9NUJ7 323 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 ASF1BQ9NVP2 202 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 MRPS17Q9Y2R5 130 aaKnown RBP10.24□□□□□ -0.77
RPL28-201ENST00000344063 NUBP2Q9Y5Y2 271 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 TEX51A0A1B0GUA7 166 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 GABRPO00591 440 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 B4GALT3O60512 393 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 TNFP01375 233 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 ZNF14P17017 642 aaPredicted RBP10.24□□□□□ -0.77
RPL28-201ENST00000344063 GZMKP49863 264 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 S100A10P60903 97 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 TAP2Q03519 686 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 SSX6Q7RTT6 188 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 OLIG3Q7RTU3 272 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 ZBTB44Q8NCP5 570 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 S100PBPQ96BU1 408 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 FAM83CQ9BQN1 747 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 ALG8Q9BVK2 526 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 ZNF436Q9C0F3 470 aaPredicted RBP10.24□□□□□ -0.77
RPL28-201ENST00000344063 GSKIPQ9P0R6 139 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 KLHL21Q9UJP4 597 aa10.24□□□□□ -0.77
RPL28-201ENST00000344063 TOR1AO14656 332 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 ABLIM3O94929 683 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 C1QBP02746 253 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 HOXB2P14652 356 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 RBM34P42696 430 aaKnown RBP10.23□□□□□ -0.77
RPL28-201ENST00000344063 SLC6A12P48065 614 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 PUM1Q14671 1186 aaKnown RBP eCLIP10.23□□□□□ -0.77
RPL28-201ENST00000344063 OPCMLQ14982 345 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 OCLNQ16625 522 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 SAXO2Q658L1 398 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 WDR20Q8TBZ3 569 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 TMEM163Q8TC26 289 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 MS4A4EQ96PG1 132 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 TREX2Q9BQ50 279 aaPredicted RBP10.23□□□□□ -0.77
RPL28-201ENST00000344063 SLC25A18Q9H1K4 315 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 TMEFF2Q9UIK5 374 aaPredicted RBP10.23□□□□□ -0.77
RPL28-201ENST00000344063 ERVK-19Q9WJR5 959 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 F8W036 122 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 KAT7O95251 611 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 SIX6O95475 246 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 ACP2P11117 423 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 AHRP35869 848 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 GPR143P51810 404 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 BLOC1S1P78537 153 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 FAM209AQ5JX71 171 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 ZNF765Q7L2R6 523 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 NLRP8Q86W28 1048 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 GRAMD2AQ8IUY3 354 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 WFDC5Q8TCV5 224 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 SFXN5Q8TD22 340 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 SLC38A5Q8WUX1 472 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 TM9SF4Q92544 642 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 RBPMSQ93062 196 aaKnown RBP10.23□□□□□ -0.77
RPL28-201ENST00000344063 TBL1XR1Q9BZK7 514 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 ADAM29Q9UKF5 820 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 A0A1W2PQU0 124 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 BLOC1S5-TXNDC5H3BN57 136 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 LIPCP11150 499 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 NPR2P20594 1047 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 TM4SF4P48230 202 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 TEKQ02763 1124 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 SYPL1Q16563 259 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 C18orf63Q68DL7 685 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 AVL9Q8NBF6 648 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 OR2L5Q8NG80 312 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 THEM6Q8WUY1 208 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 FOXJ1Q92949 421 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 MFFQ9GZY8 342 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 B3GNT2Q9NY97 397 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 RCE1Q9Y256 329 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 ASCC3Q8N3C0 2202 aaKnown RBP10.23□□□□□ -0.77
RPL28-201ENST00000344063 CIB4A0PJX0 185 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 GFYI3L273 518 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 GYPBP06028 91 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 CSF3P09919 207 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 MC2RQ01718 297 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 AIMP2Q13155 320 aaKnown RBP10.23□□□□□ -0.77
RPL28-201ENST00000344063 ITPRIPL2Q3MIP1 535 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 TP53I3Q53FA7 332 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 SLC39A5Q6ZMH5 540 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 TMEM173Q86WV6 379 aaPredicted RBP10.23□□□□□ -0.77
RPL28-201ENST00000344063 TMIEQ8NEW7 156 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 SMARCD2Q92925 531 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 NARFLQ9H6Q4 476 aa10.23□□□□□ -0.77
RPL28-201ENST00000344063 TAF1LQ8IZX4 1826 aa10.22□□□□□ -0.77
RPL28-201ENST00000344063 TRBV5-4A0A0C4DH59 114 aa10.22□□□□□ -0.77
RPL28-201ENST00000344063 A0A0G2JMP0 313 aa10.22□□□□□ -0.77
RPL28-201ENST00000344063 HYKKA2RU49 373 aa10.22□□□□□ -0.77
RPL28-201ENST00000344063 C2orf74A8MZ97 194 aa10.22□□□□□ -0.77
RPL28-201ENST00000344063 EEF1E1-BLOC1S5C9J1V9 151 aa10.22□□□□□ -0.77
RPL28-201ENST00000344063 M0R082 166 aa10.22□□□□□ -0.77
RPL28-201ENST00000344063 FBXO45P0C2W1 286 aa10.22□□□□□ -0.77
RPL28-201ENST00000344063 M6PRP20645 277 aa10.22□□□□□ -0.77
RPL28-201ENST00000344063 CST6Q15828 149 aa10.22□□□□□ -0.77
RPL28-201ENST00000344063 GFOD2Q3B7J2 385 aa10.22□□□□□ -0.77
RPL28-201ENST00000344063 SLX4IPQ5VYV7 408 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms