RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 LYARQ9NX58 379 aaKnown RBP11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 CA5BQ9Y2D0 317 aa11.65□□□□□ -0.54
SNRNP48-201ENST00000342415 ANKRD61A6NGH8 418 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 ACOD1A6NK06 481 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 HMGN4O00479 90 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 RFPL3O75679 317 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 ABLIM3O94929 683 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 PROS1P07225 676 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 LIPCP11150 499 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 RRAS2P62070 204 aaPredicted RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 GPM6BQ13491 265 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 EIF4EBP2Q13542 120 aaPredicted RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 ASTLQ6HA08 431 aaPredicted RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 LAIR2Q6ISS4 152 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 FAM111BQ6SJ93 734 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 DGLUCYQ7Z3D6 616 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 LSRQ86X29 649 aaPredicted RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 TMEM239Q8WW34 195 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 FCAMRQ8WWV6 532 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 PDXPQ96GD0 296 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 GPER1Q99527 375 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 POLDIP3Q9BY77 421 aaKnown RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 ACTRT3Q9BYD9 372 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 IL21RQ9HBE5 538 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 ATXN7L1Q9ULK2 861 aaPredicted RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 PCDHGB7Q9Y5F8 929 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 IER3IP1Q9Y5U9 82 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 A0A0B4J203 849 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 C13orf42A0A1B0GVH6 325 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 C5orf51A6NDU8 294 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 B4DGG1 531 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 ICMTO60725 284 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 AIFM1O95831 613 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 CSTAP01040 98 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 APEHP13798 732 aaKnown RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 GTF2F2P13984 249 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 GABRA5P31644 462 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 KIR2DL3P43628 341 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 HCCSP53701 268 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 SLC7A9P82251 487 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 LCTLQ6UWM7 567 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 LINC00299Q6ZSB3 139 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 OR2L2Q8NH16 312 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 RIT1Q92963 219 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 BPIFA2Q96DR5 249 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 HS6ST2Q96MM7 605 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 PTCHD1Q96NR3 888 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 OR2A14Q96R47 310 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 TRIM2Q9C040 744 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 OR8D2Q9GZM6 311 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 METTL17Q9H7H0 456 aaPredicted RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 MTHFD2LQ9H903 347 aaPredicted RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 RCE1Q9Y256 329 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 RWDD3Q9Y3V2 267 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 LRRC37AA6NMS7 1700 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 TPRP12270 2363 aaKnown RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 SLC5A10A0PJK1 596 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 HOXC11O43248 304 aaPredicted RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 DBIP07108 87 aaKnown RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 HBQ1P09105 142 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 ARFIP1P53367 373 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 ZNF767PQ75MW2 155 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 CAMKVQ8NCB2 501 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 OR52E1Q8NGJ3 308 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 SMPDL3BQ92485 455 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 TRIM43Q96BQ3 446 aaPredicted RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 ORAI1Q96D31 301 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 AMDHD1Q96NU7 426 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 LMF1Q96S06 567 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 DIMT1Q9UNQ2 313 aaKnown RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 TMEM5Q9Y2B1 443 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 NOP16Q9Y3C1 178 aaKnown RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 QSER1Q2KHR3 1735 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 TRAPPC13A5PLN9 417 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 HEPACAM2A8MVW5 462 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 PDCD5O14737 125 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 KAT7O95251 611 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 NTN1O95631 604 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 PLGP00747 810 aaPredicted RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 CEBPBP17676 345 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 PRKACBP22694 351 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 PTH2RP49190 550 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 CDC20Q12834 499 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 TOMM20Q15388 145 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 HENMT1Q5T8I9 393 aaKnown RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 FAM83HQ6ZRV2 1179 aaPredicted RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 ABHD13Q7L211 337 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 KCTD9Q7L273 389 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 OR4M1Q8NGD0 313 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 UCN3Q969E3 161 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 ARRDC3Q96B67 414 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 METTL2AQ96IZ6 378 aaKnown RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 INSM2Q96T92 566 aaPredicted RBP11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 MS4A8Q9BY19 250 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 PLA2G12AQ9BZM1 189 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 A3GALT2U3KPV4 340 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 CEP350Q5VT06 3117 aa11.64□□□□□ -0.55
SNRNP48-201ENST00000342415 TVP23AA6NH52 213 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 AGR2O95994 175 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 SYPP08247 313 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms