RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 FAM53BQ14153 422 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 SSPNQ14714 243 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 PLEKHG7Q6ZR37 379 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 TTYH2Q9BSA4 534 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 GRIP1Q9Y3R0 1128 aa11.96□□□□□ -0.5
LIN54-201ENST00000340417 MYO18AQ92614 2054 aaKnown RBP11.96□□□□□ -0.5
LIN54-201ENST00000340417 EI24O14681 340 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 PCDH17O14917 1159 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 HSPA12AO43301 675 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 WNT11O96014 354 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 CRTC2Q53ET0 693 aaPredicted RBP11.95□□□□□ -0.5
LIN54-201ENST00000340417 AMBNQ9NP70 447 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 TRIM36Q9NQ86 728 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 CRABP1P29762 137 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 GAS6Q14393 721 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 CSRP2Q16527 193 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 NKPD1Q17RQ9 610 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 RNASE12Q5GAN4 147 aaKnown RBP11.95□□□□□ -0.5
LIN54-201ENST00000340417 TCEANCQ8N8B7 351 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 DNAAF1Q8NEP3 725 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 NMD3Q96D46 503 aaKnown RBP11.95□□□□□ -0.5
LIN54-201ENST00000340417 UBXN10Q96LJ8 280 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 RXFP3Q9NSD7 469 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 TAS2R1Q9NYW7 299 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 TTKP33981 857 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 TSPAN5P62079 268 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 NIPAL3Q6P499 406 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 PIGWQ7Z7B1 504 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 OR4K13Q8NH42 304 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 HCAR1Q9BXC0 346 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 TAS2R7Q9NYW3 318 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 B3GALT1Q9Y5Z6 326 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 SERINC4A6NH21 518 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 TAPBPO15533 448 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 RIDAP52758 137 aaKnown RBP11.95□□□□□ -0.5
LIN54-201ENST00000340417 MZT1Q08AG7 82 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 ATP1A4Q13733 1029 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 GTDC1Q4AE62 458 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 KLHL17Q6TDP4 642 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 PAMR1Q6UXH9 720 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 MARCH3Q86UD3 253 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 TMPRSS12Q86WS5 348 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 POLR2J2Q9GZM3 115 aaKnown RBP11.95□□□□□ -0.5
LIN54-201ENST00000340417 EBF2Q9HAK2 575 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 INIPQ9NRY2 104 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 ZNF223Q9UK11 482 aaPredicted RBP11.95□□□□□ -0.5
LIN54-201ENST00000340417 WASF3Q9UPY6 502 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 IGHV5-51A0A0C4DH38 117 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 GFYI3L273 518 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 FAUP35544 74 aaKnown RBP11.95□□□□□ -0.5
LIN54-201ENST00000340417 C6orf52Q5T4I8 152 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 SHQ1Q6PI26 577 aaKnown RBP11.95□□□□□ -0.5
LIN54-201ENST00000340417 TRMT10AQ8TBZ6 339 aaKnown RBP11.95□□□□□ -0.5
LIN54-201ENST00000340417 EVA1AQ9H8M9 152 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 TMEM138Q9NPI0 162 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 PLA2G3Q9NZ20 509 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 FBXL4Q9UKA2 621 aa11.95□□□□□ -0.5
LIN54-201ENST00000340417 CASC3O15234 703 aaKnown RBP11.94□□□□□ -0.5
LIN54-201ENST00000340417 FCARP24071 287 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 GRPRP30550 384 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 RFC3P40938 356 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 TMPRSS3P57727 454 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 BTG2P78543 158 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 ZNF766Q5HY98 468 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 RBM48Q5RL73 367 aaKnown RBP11.94□□□□□ -0.5
LIN54-201ENST00000340417 ZNF627Q7L945 461 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 TMEM102Q8N9M5 508 aaPredicted RBP11.94□□□□□ -0.5
LIN54-201ENST00000340417 OR5L1Q8NGL2 311 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 ABHD5Q8WTS1 349 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 ZCCHC14Q8WYQ9 949 aaKnown RBP11.94□□□□□ -0.5
LIN54-201ENST00000340417 EGLN2Q96KS0 407 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 LHPPQ9H008 270 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 PLEK2Q9NYT0 353 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 BAIAP2Q9UQB8 552 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 NDUFB2O95178 105 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 C4BPBP20851 252 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 KCNAB2Q13303 367 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 IHHQ14623 411 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 CA13Q8N1Q1 262 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 OR1L3Q8NH93 324 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 CT55Q8WUE5 264 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 CTSFQ9UBX1 484 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 RIMS3Q9UJD0 308 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 PCDHGA8Q9Y5G5 932 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 IGHG1P01857 330 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 CLDN17P56750 224 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 ZNF846Q147U1 533 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 OR1C1Q15619 314 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 CLPPQ16740 277 aaPredicted RBP11.94□□□□□ -0.5
LIN54-201ENST00000340417 XKR5Q6UX68 686 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 CLIP4Q8N3C7 705 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 OR51G2Q8NGK0 314 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 FN3KQ9H479 309 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 COQ10BQ9H8M1 238 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 OAZ3Q9UMX2 235 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 LOC102725191A0A1B0GVB3 256 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 HEXAP06865 529 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 HTR1EP28566 365 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 PCBD1P61457 104 aa11.94□□□□□ -0.5
LIN54-201ENST00000340417 POU3F1Q03052 451 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms