RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TOMM34Q15785 309 aaPredicted RBP11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 CTU2Q2VPK5 515 aaKnown RBP11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 DEFB113Q30KQ7 82 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 VPS26BQ4G0F5 336 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 CPTPQ5TA50 214 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 OR2A2Q6IF42 318 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 CBLN3Q6UW01 205 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 METTL25Q8N6Q8 603 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 FNDC5Q8NAU1 212 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 OR10D3Q8NH80 312 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 OR5AK3PQ8NH89 298 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 ROBO4Q8WZ75 1007 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 COQ8BQ96D53 544 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 MTERF3Q96E29 417 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 ZNF764Q96H86 408 aaPredicted RBP11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 ADGRG7Q96K78 797 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 PPP3R2Q96LZ3 170 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 RNF145Q96MT1 663 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 MS4A4EQ96PG1 132 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 HS3ST6Q96QI5 342 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 SMR3AQ99954 134 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 PRRG4Q9BZD6 226 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 ROPN1BQ9BZX4 212 aaPredicted RBP11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 KLHL4Q9C0H6 718 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 C20orf27Q9GZN8 174 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 ACBD3Q9H3P7 528 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 ROPN1Q9HAT0 212 aaPredicted RBP11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 EML4Q9HC35 981 aaKnown RBP11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 TMED5Q9Y3A6 229 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 TESMINQ9Y4I5 508 aa11.99□□□□□ -0.49
NUDCD3-201ENST00000338427 CTIFO43310 598 aaKnown RBP11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 C1QCP02747 245 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 CRHP06850 196 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 POU2F1P14859 743 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 CCKARP32238 428 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 UGT2B10P36537 528 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 KCNJ5P48544 419 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 RPS3AP61247 264 aaKnown RBP11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 MPP2Q14168 576 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 GUSBP1Q15486 140 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 PGS1Q32NB8 556 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 PLPPR5Q32ZL2 321 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 Q71RC1 249 aaPredicted RBP11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 R3HCC1LQ7Z5L2 792 aaKnown RBP11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 NUDCD3Q8IVD9 361 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 RIMKLAQ8IXN7 391 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 CNPY4Q8N129 248 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 RIBC1Q8N443 379 aaPredicted RBP11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 ATP6V1C2Q8NEY4 427 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 B4GALNT2Q8NHY0 566 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 PHOSPHO1Q8TCT1 267 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.98□□□□□ -0.492e-7■■■■■ 64.2
NUDCD3-201ENST00000338427 OR5P2Q8WZ92 322 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 OSTF1Q92882 214 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 TUBGCP3Q96CW5 907 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 MBD6Q96DN6 1003 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 DTNBP1Q96EV8 351 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 PIK3IP1Q96FE7 263 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 BTBD2Q9BX70 525 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 PIGUQ9H490 435 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 UBQLN4Q9NRR5 601 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 GPATCH2Q9NW75 528 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 PROCRQ9UNN8 238 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 CARD8Q9Y2G2 431 aa11.98□□□□□ -0.49
NUDCD3-201ENST00000338427 TMEM114B3SHH9 223 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 C16orf97H3BN30 126 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 LINC01387J3KSC0 135 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 SCDO00767 359 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 CFLARO15519 480 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 THBDP07204 575 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 LINGO3P0C6S8 592 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 LOXP28300 417 aaPredicted RBP11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 SFTPDP35247 375 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 HPCAL1P37235 193 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 RPS26P62854 115 aaKnown RBP11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 EEF1A1P68104 462 aaKnown RBP11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 ZNF117Q03924 483 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 TP53BP2Q13625 1128 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 MLC1Q15049 377 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 ATP6AP1LQ52LC2 224 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 EEF1A1P5Q5VTE0 462 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 OR4F3Q6IEY1 312 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 CDC73Q6P1J9 531 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 ZCCHC12Q6PEW1 402 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 KRTAP1-3Q8IUG1 177 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 CLECL1Q8IZS7 167 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 GTPBP8Q8N3Z3 284 aaPredicted RBP11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 CHDHQ8NE62 594 aaPredicted RBP11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 OR5D16Q8NGK9 328 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 RFWD2Q8NHY2 731 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 ADAMTS15Q8TE58 950 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 MED18Q9BUE0 208 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 ACTRT3Q9BYD9 372 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 SERHL2Q9H4I8 314 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 NEUROD4Q9HD90 331 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 EIF3LQ9Y262 564 aaKnown RBP11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 ZNF175Q9Y473 711 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 HEATR5AQ86XA9 2040 aa11.97□□□□□ -0.49
NUDCD3-201ENST00000338427 NF1P21359 2839 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms