RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ZNF517Q6ZMY9 492 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF595Q8IYB9 648 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 SEC61A2Q9H9S3 476 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 NDRG4Q9ULP0 352 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 KLK4Q9Y5K2 254 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 LTBP1Q14766 1721 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ALDH16A1Q8IZ83 802 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 SDR9C7Q8NEX9 313 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 GPN2Q9H9Y4 310 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 DHCR7Q9UBM7 475 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PPIEQ9UNP9 301 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 FCMRO60667 390 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 GABARAPO95166 117 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 GYPBP06028 91 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 MAT1AQ00266 395 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ARHGAP11AQ6P4F7 1023 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 RPTNQ6XPR3 784 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 PLA2G2FQ9BZM2 168 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 YBX2Q9Y2T7 364 aaKnown RBP5.89□□□□□ -1.47
PRKDC-202ENST00000338368 NPIPA5E9PKD4 350 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 SEC14L2O76054 403 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 HTR1AP08908 422 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 AP3S2P59780 193 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 FAM189A2Q15884 450 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 SLX4IPQ5VYV7 408 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 TMEM64Q6YI46 380 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF547Q8IVP9 402 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 FBXL6Q8N531 539 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 THAP4Q8WY91 577 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 C7orf34Q96L11 122 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 OR5M11Q96RB7 305 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 EXO5Q9H790 373 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 NPIPA1Q9UND3 350 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 TMEM14AQ9Y6G1 99 aa5.89□□□□□ -1.47
PRKDC-202ENST00000338368 OR1D4P47884 311 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 LIM2P55344 173 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 CTXN1P60606 82 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.88□□□□□ -1.479e-7■■■□□ 15.3
PRKDC-202ENST00000338368 C8orf82Q6P1X6 216 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 CEACAM19Q7Z692 300 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 TDHQ8IZJ6 230 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 OR51L1Q8NGJ5 315 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 GFM1Q96RP9 751 aaKnown RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 TTYH2Q9BSA4 534 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 TBCCD1Q9NVR7 557 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 PRKYO43930 277 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ECDO95905 644 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 FOSL2P15408 326 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 MMP11P24347 488 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ODF4Q2M2E3 257 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 LINC01555Q8NAE3 123 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 MAP3K3Q99759 626 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 PHF7Q9BWX1 381 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ERVK13-1Q9NX77 482 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SIDT1Q9NXL6 827 aaKnown RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 LAMP5Q9UJQ1 280 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 A0A1W2PPK0 400 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ZNF726A6NNF4 738 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ORC5O43913 435 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 KCTD18Q6PI47 426 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 ATCAYQ86WG3 371 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 LRRC3BQ96PB8 259 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 UBQLN4Q9NRR5 601 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 FAM227AF5H4B4 570 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 CASP6P55212 293 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 MESP2Q0VG99 397 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 GAS6Q14393 721 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 B3GLCTQ6Y288 498 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 NKAIN4Q8IVV8 208 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SAMD12Q8N8I0 201 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 OR5T3Q8NGG3 340 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 BCL2L10Q9HD36 194 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 FKBP7Q9Y680 259 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 FUOMA2VDF0 154 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 FMO6PO60774 539 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 BCAP31P51572 246 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 WNT3P56703 355 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 RHAGQ02094 409 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 GFOD2Q3B7J2 385 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 FOXB2Q5VYV0 432 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SHISA6Q6ZSJ9 500 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SLC46A3Q7Z3Q1 461 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SIX5Q8N196 739 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 CHST4Q8NCG5 386 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 OR2T4Q8NH00 348 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 TBC1D15Q8TC07 691 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 WDR34Q96EX3 536 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SPTBN1Q01082 2364 aaKnown RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 PRKAR1BP31321 381 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 RAE1P78406 368 aaKnown RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 HSD17B12Q53GQ0 312 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 TP53I13Q8NBR0 393 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 MR1Q95460 341 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 CNRIP1Q96F85 164 aaPredicted RBP5.88□□□□□ -1.47
PRKDC-202ENST00000338368 A0A087WUU8 490 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 SERTM1A2A2V5 107 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 C5orf67F2Z3F1 127 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 OR1Q1Q15612 314 aa5.88□□□□□ -1.47
PRKDC-202ENST00000338368 LRFN4Q6PJG9 635 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms