RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ALOX5P09917 674 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 LIMS3P0CW19 117 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 LIMS4P0CW20 117 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 TEAD1P28347 426 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 ANXA11P50995 505 aaKnown RBP8.21□□□□□ -1.1
SNCA-201ENST00000336904 FABP5Q01469 135 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 LARS2Q15031 903 aaKnown RBP8.21□□□□□ -1.1
SNCA-201ENST00000336904 AMZ1Q400G9 498 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 NIPAL1Q6NVV3 410 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 ARMC6Q6NXE6 501 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 GLCCI1Q86VQ1 547 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 NATD1Q8N6N6 113 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 TMEM99Q8N816 258 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 TMEM163Q8TC26 289 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 FAM131CQ96AQ9 280 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 EFHD2Q96C19 240 aaPredicted RBP8.21□□□□□ -1.1
SNCA-201ENST00000336904 CRELD1Q96HD1 420 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 SDHCQ99643 169 aaPredicted RBP8.21□□□□□ -1.1
SNCA-201ENST00000336904 MESP1Q9BRJ9 268 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 POLDIP3Q9BY77 421 aaKnown RBP8.21□□□□□ -1.1
SNCA-201ENST00000336904 MMP27Q9H306 513 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 OR52D1Q9H346 318 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 SMURF1Q9HCE7 757 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 TXNL4BQ9NX01 149 aaKnown RBP8.21□□□□□ -1.1
SNCA-201ENST00000336904 ZSCAN32Q9NX65 697 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 COMMD3Q9UBI1 195 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 ENOPH1Q9UHY7 261 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 PHF11Q9UIL8 331 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 PCDHGB6Q9Y5F9 930 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 MED12Q93074 2177 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 STK25O00506 426 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 KDM1AO60341 852 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 GALR3O60755 368 aaPredicted RBP8.21□□□□□ -1.1
SNCA-201ENST00000336904 ALAS2P22557 587 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 NDUFS1P28331 727 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 GRPRP30550 384 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 SOX6P35712 828 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 CCR4P51679 360 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 GAS1P54826 345 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 TPTEP56180 551 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 TSPAN31Q12999 210 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 C1DQ13901 141 aaKnown RBP8.21□□□□□ -1.1
SNCA-201ENST00000336904 BAK1Q16611 211 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 PRICKLE4Q2TBC4 344 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 SPANXN2Q5MJ10 180 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 SLC36A4Q6YBV0 504 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 USP53Q70EK8 1073 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 TRIM69Q86WT6 500 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 FANK1Q8TC84 345 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 GNPDA2Q8TDQ7 276 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 SPRYD4Q8WW59 207 aaPredicted RBP8.21□□□□□ -1.1
SNCA-201ENST00000336904 ACOT11Q8WXI4 607 aaPredicted RBP8.21□□□□□ -1.1
SNCA-201ENST00000336904 ANKRD9Q96BM1 317 aaPredicted RBP8.21□□□□□ -1.1
SNCA-201ENST00000336904 PSD2Q9BQI7 771 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 PRSS27Q9BQR3 290 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 IFT27Q9BW83 186 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 NRSN2Q9GZP1 204 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 NDOR1Q9UHB4 597 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 ZNF232Q9UNY5 417 aa8.21□□□□□ -1.1
SNCA-201ENST00000336904 A0A0J9YY10 115 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 SPTY2D1-AS1A0A0U1RR47 76 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 PPP1R3DO95685 299 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 GPR75O95800 540 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 CBX7O95931 251 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 CSF2P04141 144 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 NGFRP08138 427 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 SMIM10L1P0DMW3 83 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 OR1D4P47884 311 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 EEF1A1P68104 462 aaKnown RBP8.2□□□□□ -1.1
SNCA-201ENST00000336904 STX4Q12846 297 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 GNA13Q14344 377 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 FBXO43Q4G163 708 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 EOGTQ5NDL2 527 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 ZNF620Q6ZNG0 422 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 SYT9Q86SS6 491 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 VWA5B2Q8N398 1253 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 FAM26EQ8N5C1 309 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 OR10H4Q8NGA5 316 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 OR13C5Q8NGS8 318 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 NT5CQ8TCD5 201 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 MMABQ96EY8 250 aaPredicted RBP8.2□□□□□ -1.1
SNCA-201ENST00000336904 SMIM10Q96HG1 83 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 UBQLN3Q9H347 655 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 CACYBPQ9HB71 228 aaKnown RBP8.2□□□□□ -1.1
SNCA-201ENST00000336904 MEPEQ9NQ76 525 aaPredicted RBP8.2□□□□□ -1.1
SNCA-201ENST00000336904 UCKL1Q9NWZ5 548 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 LRIT1Q9P2V4 623 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 TESQ9UGI8 421 aaKnown RBP8.2□□□□□ -1.1
SNCA-201ENST00000336904 ERVK-19Q9WJR5 959 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 GRIP1Q9Y3R0 1128 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 THADAQ6YHU6 1953 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 OR5K3A6NET4 321 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 SURF4O15260 269 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 STX11O75558 287 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 MSL3P1P0C860 447 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 UBE2IP63279 158 aaKnown RBP8.2□□□□□ -1.1
SNCA-201ENST00000336904 BNC1Q01954 994 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 PGGHGQ32M88 737 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 ARHGAP11BQ3KRB8 267 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 LAPTM4BQ86VI4 370 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms