RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 BRF2Q9HAW0 419 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 ZDHHC3Q9NYG2 299 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 RPS6KB2Q9UBS0 482 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 OR51B4Q9Y5P0 310 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 UGDHO60701 494 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 TGFB1P01137 390 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 RAB11FIP2Q7L804 512 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 COMMD6Q7Z4G1 85 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 ZNF454Q8N9F8 522 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 GPR26Q8NDV2 337 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 CXorf40BQ96DE9 158 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 ALG14Q96F25 216 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 ACTR6Q9GZN1 396 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 C20orf85Q9H1P6 137 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 MBD1Q9UIS9 605 aaPredicted RBP16.97■□□□□ 0.31
PKP3-201ENST00000331563 CBLCQ9ULV8 474 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 MTX2O75431 263 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 FURINP09958 794 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 XPAP23025 273 aaPredicted RBP16.97■□□□□ 0.31
PKP3-201ENST00000331563 NFYAP23511 347 aaPredicted RBP16.97■□□□□ 0.31
PKP3-201ENST00000331563 HSD3B2P26439 372 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 CSNK1DP48730 415 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 MTNR1BP49286 362 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 CDK5Q00535 292 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 HFEQ30201 348 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 FCRLBQ6BAA4 426 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 GRHL2Q6ISB3 625 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 FBXO46Q6PJ61 603 aaPredicted RBP16.97■□□□□ 0.31
PKP3-201ENST00000331563 HORMAD2Q8N7B1 307 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 FCRL4Q96PJ5 515 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 RBM14Q96PK6 669 aaKnown RBP16.97■□□□□ 0.31
PKP3-201ENST00000331563 ZNF251Q9BRH9 671 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 SARGQ9BW04 601 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 BTBD1Q9H0C5 482 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 DNTTIP1Q9H147 329 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 OR10A4Q9H209 315 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 SDHAF3Q9NRP4 125 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 ASB6Q9NWX5 421 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 GPR160Q9UJ42 338 aa16.97■□□□□ 0.31
PKP3-201ENST00000331563 H0YIV9 168 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 PEX14O75381 377 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 ANKRD34CP0C6C1 535 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 RAB3BP20337 219 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 MLLT1Q03111 559 aaPredicted RBP16.96■□□□□ 0.31
PKP3-201ENST00000331563 LMAN2Q12907 356 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 SFXN4Q6P4A7 337 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 Q6ZNB5 142 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 TMPRSS11BQ86T26 416 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 SLITRK4Q8IW52 837 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 EIF4E3Q8N5X7 224 aaKnown RBP16.96■□□□□ 0.31
PKP3-201ENST00000331563 APOBEC4Q8WW27 367 aaKnown RBP16.96■□□□□ 0.31
PKP3-201ENST00000331563 TCEAL3Q969E4 200 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 ZNF354BQ96LW1 612 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 BRD9Q9H8M2 597 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 MRPS18AQ9NVS2 196 aaKnown RBP16.96■□□□□ 0.31
PKP3-201ENST00000331563 SLC6A5Q9Y345 797 aa16.96■□□□□ 0.31
PKP3-201ENST00000331563 A0A0G2JPF8 293 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 HNRNPCL3B7ZW38 293 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 PGRMC2O15173 223 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 IFNA4P05014 189 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 HNRNPCL4P0DMR1 293 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 ZNF155Q12901 538 aaPredicted RBP16.96■□□□□ 0.3
PKP3-201ENST00000331563 NDUFA9Q16795 377 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 EOGTQ5NDL2 527 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 HACD4Q5VWC8 232 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 SERPINA13PQ6UXR4 307 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 Q6ZTK2 550 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 IKBIPQ70UQ0 350 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 OR1M1Q8NGA1 313 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 NKX6-2Q9C056 277 aaPredicted RBP16.96■□□□□ 0.3
PKP3-201ENST00000331563 EVA1AQ9H8M9 152 aa16.96■□□□□ 0.3
PKP3-201ENST00000331563 SLC9B1P1A6NJY1 282 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 ANXA2P2A6NMY6 339 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 ANHXE9PGG2 379 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 LEFTY2O00292 366 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 RNF13O43567 381 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 RP2O75695 350 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 EIF3GO75821 320 aaKnown RBP eCLIP16.95■□□□□ 0.3
PKP3-201ENST00000331563 SIX6O95475 246 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 KLK1P06870 262 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 UGT2B7P16662 529 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 VEGFCP49767 419 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 B4GALNT1Q00973 533 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 MMP21Q8N119 569 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 SFT2D1Q8WV19 159 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 RFKQ969G6 155 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 MRPS24Q96EL2 167 aaKnown RBP16.95■□□□□ 0.3
PKP3-201ENST00000331563 MRPL48Q96GC5 212 aaKnown RBP16.95■□□□□ 0.3
PKP3-201ENST00000331563 TBX5Q99593 518 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 GSDMCQ9BYG8 508 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 PRDM9Q9NQV7 894 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 GPN3Q9UHW5 284 aaPredicted RBP16.95■□□□□ 0.3
PKP3-201ENST00000331563 NOTCH4Q99466 2003 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 ZNF197O14709 1029 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 WNT1P04628 370 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 ACAA1P09110 424 aaPredicted RBP16.95■□□□□ 0.3
PKP3-201ENST00000331563 ZNF528Q3MIS6 628 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 SLC25A25Q6KCM7 469 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 LILRA6Q6PI73 481 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 PRSS45Q7RTY3 260 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms