RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 HCFC1P51610 2035 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 NCKAP5O14513 1909 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 A0A0G2JNJ9 132 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 DVL2O14641 736 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 SCAMP2O15127 329 aaKnown RBP5.75□□□□□ -1.49
SMG1-201ENST00000330588 CTIFO43310 598 aaKnown RBP5.75□□□□□ -1.49
SMG1-201ENST00000330588 HCRTR2O43614 444 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 REM1O75628 298 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 NKX2-2O95096 273 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 ZWINTO95229 277 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 GSNP06396 782 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 CRHP06850 196 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 KRT16P08779 473 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 IFNGR1P15260 489 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 BMP7P18075 431 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 PRPS1L1P21108 318 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 GRK2P25098 689 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 MC3RP41968 323 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 CLK3P49761 638 aaKnown RBP5.75□□□□□ -1.49
SMG1-201ENST00000330588 ASCL1P50553 236 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 SLC18A1P54219 525 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 GFRA1P56159 465 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 DSCR4P56555 118 aaPredicted RBP5.75□□□□□ -1.49
SMG1-201ENST00000330588 SESN3P58005 492 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 MRPS35P82673 323 aaKnown RBP5.75□□□□□ -1.49
SMG1-201ENST00000330588 BTKQ06187 659 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 ZNF155Q12901 538 aaPredicted RBP5.75□□□□□ -1.49
SMG1-201ENST00000330588 RCAN2Q14206 197 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 CDSNQ15517 529 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 TAF11Q15544 211 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 AP1ARQ63HQ0 302 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 GTF2IRD2BQ6EKJ0 949 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 ZNF585AQ6P3V2 769 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 AAGABQ6PD74 315 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 ANGPTL8Q6UXH0 198 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 TMEM64Q6YI46 380 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 LARP4Q71RC2 724 aaKnown RBP eCLIP5.75□□□□□ -1.49
SMG1-201ENST00000330588 GTF2IRD2Q86UP8 949 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 MISPQ8IVT2 679 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 SLC44A2Q8IWA5 706 aaPredicted RBP5.75□□□□□ -1.49
SMG1-201ENST00000330588 FADS6Q8N9I5 356 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 CDRT4Q8N9R6 151 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 WDSUB1Q8N9V3 476 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 OR2T11Q8NH01 316 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 OR2W6PQ8NHA6 318 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 SFXN5Q8TD22 340 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 KAT2AQ92830 837 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 ABTB1Q969K4 478 aaPredicted RBP5.75□□□□□ -1.49
SMG1-201ENST00000330588 TMBIM1Q969X1 311 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 MOAP1Q96BY2 351 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 PPCDCQ96CD2 204 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 WDYHV1Q96HA8 205 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 JSRP1Q96MG2 331 aaPredicted RBP5.75□□□□□ -1.49
SMG1-201ENST00000330588 STACQ99469 402 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 PRPF18Q99633 342 aaKnown RBP5.75□□□□□ -1.49
SMG1-201ENST00000330588 UGT2B28Q9BY64 529 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 PARD6BQ9BYG5 372 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 DUSP22Q9NRW4 184 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 DCAF16Q9NXF7 216 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 KLRF1Q9NZS2 232 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 SLC17A7Q9P2U7 560 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 Q9UFV3 132 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 DUSP13Q9UII6 198 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 CBLCQ9ULV8 474 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 POLR3HQ9Y535 204 aaPredicted RBP5.75□□□□□ -1.49
SMG1-201ENST00000330588 SVILO95425 2214 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 MYO7BQ6PIF6 2116 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 C15orf38-AP3S2A0A0A6YYH1 394 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 A0A1W2PQD3 144 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 C7orf72A4D263 438 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 SYT5O00445 386 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 PIP5K1BO14986 540 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 RGS16O15492 202 aaPredicted RBP5.74□□□□□ -1.49
SMG1-201ENST00000330588 EMC8O43402 210 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 FADS1O60427 444 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 ZNF205O95201 554 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 SERPINE1P05121 402 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 JUNP05412 331 aaKnown RBP5.74□□□□□ -1.49
SMG1-201ENST00000330588 CHRNGP07510 517 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 GUSBP08236 651 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 LINC00032P0C843 101 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 BCKDHAP12694 445 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 PEPDP12955 493 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 CYP4B1P13584 511 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 TACR1P25103 407 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 EVI2BP34910 448 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 OPRM1P35372 400 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 HPCAL1P37235 193 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 PRIM2P49643 509 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 CORO7P57737 925 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 RPL38P63173 70 aaKnown RBP5.74□□□□□ -1.49
SMG1-201ENST00000330588 IRX1P78414 480 aaPredicted RBP5.74□□□□□ -1.49
SMG1-201ENST00000330588 TXNL4AP83876 142 aaKnown RBP5.74□□□□□ -1.49
SMG1-201ENST00000330588 PRR5P85299 388 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 SORDQ00796 357 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 EGR3Q06889 387 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 ZNF844Q08AG5 666 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 FGFBP1Q14512 234 aa5.74□□□□□ -1.49
SMG1-201ENST00000330588 DPY19L1Q2PZI1 675 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms