RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 DVL2O14641 736 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 RGS9O75916 674 aaPredicted RBP14.3□□□□□ -0.12
BRCC3-201ENST00000330045 ERP29P30040 261 aaKnown RBP14.3□□□□□ -0.12
BRCC3-201ENST00000330045 CLDN2P57739 230 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 SGCGQ13326 291 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 SNAP47Q5SQN1 464 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 GRPEL2Q8TAA5 225 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 UPRTQ96BW1 309 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 ART5Q96L15 291 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 MARVELD1Q9BSK0 173 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 C1QTNF2Q9BXJ5 285 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 KCNN2Q9H2S1 579 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 OR52D1Q9H346 318 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 BABAM2Q9NXR7 383 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 NTMQ9P121 344 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 SLC17A4Q9Y2C5 497 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 KCNJ13O60928 360 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 RNGTTO60942 597 aaKnown RBP14.3□□□□□ -0.12
BRCC3-201ENST00000330045 ZGLP1P0C6A0 271 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 ELK1P19419 428 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 MTNR1BP49286 362 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 FAPQ12884 760 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 EFR3AQ14156 821 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 ARHGAP11BQ3KRB8 267 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 IDNKQ5T6J7 187 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 ZNF57Q68EA5 555 aaPredicted RBP14.3□□□□□ -0.12
BRCC3-201ENST00000330045 TRILQ7L0X0 811 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 LIX1LQ8IVB5 337 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 GAL3ST3Q96A11 431 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 DPH1Q9BZG8 443 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 RPRD1BQ9NQG5 326 aaKnown RBP14.3□□□□□ -0.12
BRCC3-201ENST00000330045 GDE1Q9NZC3 331 aa14.3□□□□□ -0.12
BRCC3-201ENST00000330045 LOC102723532A0A0G2JNH3 316 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 UNC119BA6NIH7 251 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 ZNF888P0CJ79 500 aaPredicted RBP14.29□□□□□ -0.12
BRCC3-201ENST00000330045 C5AR1P21730 350 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 ZNF136P52737 540 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 CSTF1Q05048 431 aaKnown RBP14.29□□□□□ -0.12
BRCC3-201ENST00000330045 RUNX3Q13761 415 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 SMARCD3Q6STE5 483 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 MEPCEQ7L2J0 689 aaKnown RBP14.29□□□□□ -0.12
BRCC3-201ENST00000330045 DGLUCYQ7Z3D6 616 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 VN1R4Q7Z5H5 301 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 NR2C2APQ86WQ0 139 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 BRIX1Q8TDN6 353 aaKnown RBP14.29□□□□□ -0.12
BRCC3-201ENST00000330045 ZFPM2Q8WW38 1151 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 TBX5Q99593 518 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 ALG8Q9BVK2 526 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 MED20Q9H944 212 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 ACOXLQ9NUZ1 547 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 EXTL2Q9UBQ6 330 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 SIRT4Q9Y6E7 314 aaPredicted RBP14.29□□□□□ -0.12
BRCC3-201ENST00000330045 ZC3H12DA2A288 527 aaKnown RBP14.29□□□□□ -0.12
BRCC3-201ENST00000330045 ORC5O43913 435 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 SLC43A1O75387 559 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 ADH1BP00325 375 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 EEF1A1P68104 462 aaKnown RBP14.29□□□□□ -0.12
BRCC3-201ENST00000330045 GPR68Q15743 365 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 DUSP5Q16690 384 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 EIPR1Q53HC9 387 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 NIPAL3Q6P499 406 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 RANBP3LQ86VV4 465 aaPredicted RBP14.29□□□□□ -0.12
BRCC3-201ENST00000330045 LSRQ86X29 649 aaPredicted RBP14.29□□□□□ -0.12
BRCC3-201ENST00000330045 OR4E2Q8NGC2 313 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 OR52L1Q8NGH7 329 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 SDF2Q99470 211 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 PRSS27Q9BQR3 290 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 WACQ9BTA9 647 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 LMAN2LQ9H0V9 348 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 FN3KQ9H479 309 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 ING3Q9NXR8 418 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 COLEC10Q9Y6Z7 277 aa14.29□□□□□ -0.12
BRCC3-201ENST00000330045 CENPVL1A0A0U1RR11 272 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 FUT1P19526 365 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 GDI1P31150 447 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 GZMKP49863 264 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 RPS21P63220 83 aaKnown RBP14.28□□□□□ -0.12
BRCC3-201ENST00000330045 TNFRSF17Q02223 184 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 RGS1Q08116 209 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 DUSP8Q13202 625 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 C2orf27AQ580R0 203 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 CCNJQ5T5M9 372 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 NANOGNBQ7Z5D8 188 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 AMIGO1Q86WK6 493 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 PAQR7Q86WK9 346 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 OR2L13Q8N349 312 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 TMEM99Q8N816 258 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 OR4K14Q8NGD5 310 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 FANK1Q8TC84 345 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 ZFAND1Q8TCF1 268 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 UBL7Q96S82 380 aaPredicted RBP14.28□□□□□ -0.12
BRCC3-201ENST00000330045 CD180Q99467 661 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 GON7Q9BXV9 100 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 KIR3DX1Q9H7L2 352 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 TRPV4Q9HBA0 871 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 DZANK1Q9NVP4 752 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 SIDT1Q9NXL6 827 aaKnown RBP14.28□□□□□ -0.12
BRCC3-201ENST00000330045 SCN3AQ9NY46 2000 aa14.28□□□□□ -0.12
BRCC3-201ENST00000330045 A0A0G2JMP0 313 aa14.27□□□□□ -0.12
BRCC3-201ENST00000330045 A0A0X1KG70 313 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms