RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 TMED5Q9Y3A6 229 aa20.9■□□□□ 0.94
TMEM54-201ENST00000329151 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.89■□□□□ 0.93
TMEM54-201ENST00000329151 A0A1W2PRB8 838 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 TNFSF11O14788 317 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 SS18L1O75177 396 aaPredicted RBP20.89■□□□□ 0.93
TMEM54-201ENST00000329151 NUDT14O95848 222 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 OPN1LWP04000 364 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 TUBBP07437 444 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 SLC6A8P48029 635 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 PPP2R2BQ00005 443 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.89■□□□□ 0.93
TMEM54-201ENST00000329151 TMEM44Q2T9K0 475 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 ALKBH2Q6NS38 261 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 ZCCHC12Q6PEW1 402 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 OR4C3Q8NH37 302 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 TACO1Q9BSH4 297 aaKnown RBP20.89■□□□□ 0.93
TMEM54-201ENST00000329151 TRMOQ9BU70 441 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 ACSS1Q9NUB1 689 aaPredicted RBP20.89■□□□□ 0.93
TMEM54-201ENST00000329151 MED17Q9NVC6 651 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 PTGDR2Q9Y5Y4 395 aa20.89■□□□□ 0.93
TMEM54-201ENST00000329151 TMEM114B3SHH9 223 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 H3BNH8 94 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 KCNK2O95069 426 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 SDC1P18827 310 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 MAPK1P28482 360 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 RPL3P39023 403 aaKnown RBP20.88■□□□□ 0.93
TMEM54-201ENST00000329151 EIF1P41567 113 aaKnown RBP20.88■□□□□ 0.93
TMEM54-201ENST00000329151 POU6F2P78424 691 aaPredicted RBP20.88■□□□□ 0.93
TMEM54-201ENST00000329151 KIAA0040Q15053 153 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 GUSBP1Q15486 140 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 TMEM201Q5SNT2 666 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 MFSD12Q6NUT3 480 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 ZNF704Q6ZNC4 412 aaPredicted RBP20.88■□□□□ 0.93
TMEM54-201ENST00000329151 EIF1ADQ8N9N8 165 aaKnown RBP20.88■□□□□ 0.93
TMEM54-201ENST00000329151 ZNF527Q8NB42 609 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 SLC16A11Q8NCK7 471 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 B4GALNT2Q8NHY0 566 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 ACTR6Q9GZN1 396 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 C12orf49Q9H741 205 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 ZCCHC3Q9NUD5 404 aaKnown RBP20.88■□□□□ 0.93
TMEM54-201ENST00000329151 SNX8Q9Y5X2 465 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 USF3Q68DE3 2245 aa20.88■□□□□ 0.93
TMEM54-201ENST00000329151 C7orf72A4D263 438 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 GJE1A6NN92 205 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 TBX19O60806 448 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 LINC00032P0C843 101 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 ACP2P11117 423 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 KRT4P19013 534 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 PTH2RP49190 550 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 CARD18P57730 90 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 DUSP5Q16690 384 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 PLPPR5Q32ZL2 321 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 SPDYE7PQ495Y7 208 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 LRIG3Q6UXM1 1119 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 PHOSPHO1Q8TCT1 267 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 MTERF3Q96E29 417 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 KLHL15Q96M94 604 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 GSX2Q9BZM3 304 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 TNFRSF12AQ9NP84 129 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 BAIAP2L1Q9UHR4 511 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 GPR52Q9Y2T5 361 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 CCL27Q9Y4X3 112 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 CSPG4Q6UVK1 2322 aa20.87■□□□□ 0.93
TMEM54-201ENST00000329151 NPIPB8E9PQR5 432 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 IL11P20809 199 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 PCSK6P29122 969 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 SFTPDP35247 375 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 ZNF385BQ569K4 471 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 STAC2Q6ZMT1 411 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 C10orf107Q8IVU9 208 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 GSPT2Q8IYD1 628 aaKnown RBP20.86■□□□□ 0.93
TMEM54-201ENST00000329151 LILRA2Q8N149 483 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 C4orf33Q8N1A6 199 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 STEAP2Q8NFT2 490 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 OSTF1Q92882 214 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 OTUB1Q96FW1 271 aaPredicted RBP20.86■□□□□ 0.93
TMEM54-201ENST00000329151 PLPPR2Q96GM1 343 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 BTBD2Q9BX70 525 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 TXLNGYQ9BZA5 131 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 EML4Q9HC35 981 aaKnown RBP20.86■□□□□ 0.93
TMEM54-201ENST00000329151 NGBQ9NPG2 151 aa20.86■□□□□ 0.93
TMEM54-201ENST00000329151 RAI1Q7Z5J4 1906 aaPredicted RBP20.86■□□□□ 0.93
TMEM54-201ENST00000329151 FN1P02751 2386 aaKnown RBP20.86■□□□□ 0.93
TMEM54-201ENST00000329151 NUP214P35658 2090 aaPredicted RBP20.85■□□□□ 0.93
TMEM54-201ENST00000329151 TRIM64A6NGJ6 449 aa20.85■□□□□ 0.93
TMEM54-201ENST00000329151 TRIM64BA6NI03 449 aa20.85■□□□□ 0.93
TMEM54-201ENST00000329151 ADAMDEC1O15204 470 aa20.85■□□□□ 0.93
TMEM54-201ENST00000329151 TRIM13O60858 407 aa20.85■□□□□ 0.93
TMEM54-201ENST00000329151 KRT16P08779 473 aa20.85■□□□□ 0.93
TMEM54-201ENST00000329151 EFNA1P20827 205 aaPredicted RBP20.85■□□□□ 0.93
TMEM54-201ENST00000329151 CCNJQ5T5M9 372 aa20.85■□□□□ 0.93
TMEM54-201ENST00000329151 TRABD2AQ86V40 505 aa20.85■□□□□ 0.93
TMEM54-201ENST00000329151 HOXB13Q92826 284 aaPredicted RBP20.85■□□□□ 0.93
TMEM54-201ENST00000329151 C16orf58Q96GQ5 468 aa20.85■□□□□ 0.93
TMEM54-201ENST00000329151 MARK4Q96L34 752 aa20.85■□□□□ 0.93
TMEM54-201ENST00000329151 HOXD1Q9GZZ0 328 aa20.85■□□□□ 0.93
TMEM54-201ENST00000329151 NTMQ9P121 344 aa20.85■□□□□ 0.93
TMEM54-201ENST00000329151 FAF1Q9UNN5 650 aaPredicted RBP20.85■□□□□ 0.93
TMEM54-201ENST00000329151 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.84■□□□□ 0.93
TMEM54-201ENST00000329151 A0A1W2PQD3 144 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms