RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 ACTG2P63267 376 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 POU4F2Q12837 409 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 AQP6Q13520 282 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 PHF19Q5T6S3 580 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 ELP4Q96EB1 424 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 C19orf43Q9BQ61 176 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 EXO5Q9H790 373 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 TMEFF2Q9UIK5 374 aaPredicted RBP12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 AK6Q9Y3D8 172 aaKnown RBP12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 LCMT2O60294 686 aaKnown RBP12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 APBB3O95704 486 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 IL7P13232 177 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 EN2P19622 333 aaPredicted RBP12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 USP51Q70EK9 711 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 PAQR7Q86WK9 346 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 CALHM3Q86XJ0 350 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 OR8S1Q8NH09 359 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 TRMT10AQ8TBZ6 339 aaKnown RBP12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 FAM3CQ92520 227 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 DAZLQ92904 295 aaKnown RBP12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 MROQ9BYG7 248 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 RNF121Q9H920 327 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 EVA1BQ9NVM1 165 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 BABAM2Q9NXR7 383 aa12.9□□□□□ -0.34
DNMT3B-202ENST00000328111 FXYD6-FXYD2A0A087WZ82 144 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 POLR1CO15160 346 aaPredicted RBP12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 CDC40O60508 579 aaKnown RBP eCLIP12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 OLFM2O95897 454 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 DRD1P21728 446 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 SNRPD2P62316 118 aaKnown RBP12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 ARFRP1Q13795 201 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 GRM7Q14831 915 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 SLX4IPQ5VYV7 408 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 SFRP4Q6FHJ7 346 aaPredicted RBP12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 TCTN3Q6NUS6 607 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 LRFN4Q6PJG9 635 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 PRR22Q8IZ63 422 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 MFSD9Q8NBP5 474 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 FXYD6Q9H0Q3 95 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 SPHK1Q9NYA1 384 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 PFDN2Q9UHV9 154 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 IGLV3-16A0A075B6K0 115 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 METTL15A6NJ78 407 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 GAPDHSO14556 408 aaPredicted RBP12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 PRAMEF2O60811 474 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 IL1AP01583 271 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 SCG5P05408 212 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 PRKCDQ05655 676 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 DPTQ07507 201 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 C11orf91Q3C1V1 193 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 SLC48A1Q6P1K1 146 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 MCATQ8IVS2 390 aaKnown RBP12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 OR13C2Q8NGS9 318 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 NEK7Q8TDX7 302 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 TOE1Q96GM8 510 aaKnown RBP12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 ZNF582Q96NG8 517 aaPredicted RBP12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 OR2B2Q9GZK3 357 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 RBM38Q9H0Z9 239 aaKnown RBP12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 METTL7AQ9H8H3 244 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 MBD1Q9UIS9 605 aaPredicted RBP12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 BAIAP2Q9UQB8 552 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 ZNF20P17024 532 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 SLC6A9P48067 706 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 ACSM3Q53FZ2 586 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 KLHL26Q53HC5 615 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 TMEM240Q5SV17 173 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 BCL2L15Q5TBC7 163 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 UBE2UQ5VVX9 321 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 MTFR2Q6P444 385 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 TMPRSS9Q7Z410 1059 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 GPAT4Q86UL3 456 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 ARMC10Q8N2F6 343 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 C15orf40Q8WUR7 153 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 FCAMRQ8WWV6 532 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 RBP7Q96R05 134 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 A0A1W2PR48 441 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 MEIOCA2RUB1 952 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 HMGN4O00479 90 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 MAS1P04201 325 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 SLC19A1P41440 591 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 SLC1A3P43003 542 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 RPS25P62851 125 aaKnown RBP12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 HES5Q5TA89 166 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 AGAP6Q5VW22 663 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 QSOX2Q6ZRP7 698 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 C4orf36Q96KX1 117 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 AGAP4Q96P64 663 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 OR52A5Q9H2C5 316 aa12.89□□□□□ -0.35
DNMT3B-202ENST00000328111 RP1P56715 2156 aa12.88□□□□□ -0.35
DNMT3B-202ENST00000328111 POM121BA6NF01 834 aa12.88□□□□□ -0.35
DNMT3B-202ENST00000328111 PRAMEF26H0Y7S4 382 aa12.88□□□□□ -0.35
DNMT3B-202ENST00000328111 NCR1O76036 304 aa12.88□□□□□ -0.35
DNMT3B-202ENST00000328111 CLEC2LP0C7M8 214 aa12.88□□□□□ -0.35
DNMT3B-202ENST00000328111 PSMB10P40306 273 aa12.88□□□□□ -0.35
DNMT3B-202ENST00000328111 MAN2A2P49641 1150 aa12.88□□□□□ -0.35
DNMT3B-202ENST00000328111 PDX1P52945 283 aa12.88□□□□□ -0.35
DNMT3B-202ENST00000328111 ERVK-25P63136 954 aa12.88□□□□□ -0.35
DNMT3B-202ENST00000328111 TMEM215Q68D42 235 aa12.88□□□□□ -0.35
DNMT3B-202ENST00000328111 KCTD18Q6PI47 426 aaPredicted RBP12.88□□□□□ -0.35
DNMT3B-202ENST00000328111 LILRA6Q6PI73 481 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms