RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 IZUMO1Q8IYV9 350 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 LINC00469Q8N7U9 141 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 KAT2AQ92830 837 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 SCAMP4Q969E2 229 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 TBX5Q99593 518 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 IFT27Q9BW83 186 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 MTG2Q9H4K7 406 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 NEUROD4Q9HD90 331 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 TRIM36Q9NQ86 728 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 RCE1Q9Y256 329 aa11.93□□□□□ -0.5
CCDC60-201ENST00000327554 PCDHGA9Q9Y5G4 932 aaKnown RBP11.93□□□□□ -0.5
CCDC60-201ENST00000327554 MYO10Q9HD67 2058 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 ZC3H12DA2A288 527 aaKnown RBP11.92□□□□□ -0.5
CCDC60-201ENST00000327554 TSPAN6O43657 245 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 PLPP2O43688 288 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 SIGLEC6O43699 453 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 SDC3O75056 442 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 SNAPC5O75971 98 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 NR2F1P10589 423 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 IFNGR1P15260 489 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 CD53P19397 219 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 RAB3BP20337 219 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 IFNGR2P38484 337 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 PCBP4P57723 403 aaKnown RBP11.92□□□□□ -0.5
CCDC60-201ENST00000327554 PSMA6P60900 246 aaKnown RBP11.92□□□□□ -0.5
CCDC60-201ENST00000327554 TSTA3Q13630 321 aaPredicted RBP11.92□□□□□ -0.5
CCDC60-201ENST00000327554 GK2Q14410 553 aaPredicted RBP11.92□□□□□ -0.5
CCDC60-201ENST00000327554 SLC25A25Q6KCM7 469 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 NHLRC1Q6VVB1 395 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 C17orf47Q8NEP4 570 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 OR2AP1Q8NGE2 309 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 OR5M9Q8NGP3 310 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
CCDC60-201ENST00000327554 ZDHHC1Q8WTX9 485 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 XAGE5Q8WWM1 108 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 OSTF1Q92882 214 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 MS4A4AQ96JQ5 239 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 ANKRD19PQ9H560 264 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 SEMA4GQ9NTN9 838 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 SLC45A1Q9Y2W3 748 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 DDNO94850 711 aaPredicted RBP11.92□□□□□ -0.5
CCDC60-201ENST00000327554 KDM4BO94953 1096 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 HPP00738 406 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 HIST1H2ABP04908 130 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 SAGP10523 405 aaPredicted RBP11.92□□□□□ -0.5
CCDC60-201ENST00000327554 TYRP14679 529 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 FRKP42685 505 aaPredicted RBP11.92□□□□□ -0.5
CCDC60-201ENST00000327554 GPR85P60893 370 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 S100A12P80511 92 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 SLC3A1Q07837 685 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 UBXN2BQ14CS0 331 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 ELFN2Q5R3F8 820 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 MORN1Q5T089 497 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 ZDHHC20Q5W0Z9 365 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 BAIAP2L2Q6UXY1 529 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 HIST3H2AQ7L7L0 130 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 OR6V1Q8N148 313 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 KRT78Q8N1N4 520 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 SLAIN1Q8ND83 568 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 HIST1H2ACQ93077 130 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 TMEM159Q96B96 161 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 LRRC46Q96FV0 321 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 PLEKHA1Q9HB21 404 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 ABRACLQ9P1F3 81 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 B4GALT6Q9UBX8 382 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 IL20RAQ9UHF4 553 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 PURGQ9UJV8 347 aaKnown RBP11.92□□□□□ -0.5
CCDC60-201ENST00000327554 KCNK7Q9Y2U2 307 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 DYRK1BQ9Y463 629 aa11.92□□□□□ -0.5
CCDC60-201ENST00000327554 DENND4CQ5VZ89 1909 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 SLC5A10A0PJK1 596 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 HMSDA8MTL9 139 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 ARPC5O15511 151 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 TBX19O60806 448 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 SIX6O95475 246 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 CHRM4P08173 479 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 H2AFB1P0C5Y9 115 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 PDHA2P29803 388 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 BUD31P41223 144 aaPredicted RBP11.91□□□□□ -0.5
CCDC60-201ENST00000327554 CTSCP53634 463 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 TAS2R41P59536 307 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 FUT5Q11128 374 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 MAP2K5Q13163 448 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 MELKQ14680 651 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 TRAM1Q15629 374 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 RTP2Q5QGT7 225 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 ZNF660Q6AZW8 331 aaPredicted RBP11.91□□□□□ -0.5
CCDC60-201ENST00000327554 CXXC5Q7LFL8 322 aaKnown RBP11.91□□□□□ -0.5
CCDC60-201ENST00000327554 TRMT11Q7Z4G4 463 aaKnown RBP11.91□□□□□ -0.5
CCDC60-201ENST00000327554 SYT9Q86SS6 491 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 BRI3BPQ8WY22 251 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 TM4SF18Q96CE8 201 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 ELP4Q96EB1 424 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 PGLYRP3Q96LB9 341 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 FAM83CQ9BQN1 747 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 YIPF4Q9BSR8 244 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 SUV39H2Q9H5I1 410 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 COA4Q9NYJ1 87 aa11.91□□□□□ -0.5
CCDC60-201ENST00000327554 H2AFY2Q9P0M6 372 aaPredicted RBP11.91□□□□□ -0.5
CCDC60-201ENST00000327554 ZNF69Q9UC07 566 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms