RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 NEIL3Q8TAT5 605 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 WDR60Q8WVS4 1066 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 GTF2H4Q92759 462 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 SLC22A18Q96BI1 424 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 FAM136AQ96C01 138 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 UCN2Q96RP3 112 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 LPAR4Q99677 370 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 RMND5AQ9H871 391 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 MYOZ1Q9NP98 299 aaPredicted RBP5.97□□□□□ -1.45
CSTF3-201ENST00000323959 ADAP2Q9NPF8 381 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 PDP1Q9P0J1 537 aaPredicted RBP5.97□□□□□ -1.45
CSTF3-201ENST00000323959 CORO2BQ9UQ03 480 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 RNF115Q9Y4L5 304 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 DNAJC13O75165 2243 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 NOTCH3Q9UM47 2321 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 PINLYPA6NC86 204 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 H3BNX3 289 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 RNASET2O00584 256 aaKnown RBP5.97□□□□□ -1.45
CSTF3-201ENST00000323959 GPIP06744 558 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 G6PDP11413 515 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 SDC1P18827 310 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 TIA1P31483 386 aaKnown RBP eCLIP5.97□□□□□ -1.452e-8■■■■□ 26.3
CSTF3-201ENST00000323959 GDF5P43026 501 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 PDLIM4P50479 330 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 GPR85P60893 370 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 UFM1P61960 85 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 NAE1Q13564 534 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 KPNB1Q14974 876 aaKnown RBP5.97□□□□□ -1.45
CSTF3-201ENST00000323959 RUNDC3AQ59EK9 446 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 XKR6Q5GH73 641 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 ANXA8L1Q5VT79 327 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 NOXRED1Q6NXP6 359 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 R3HCC1LQ7Z5L2 792 aaKnown RBP5.97□□□□□ -1.45
CSTF3-201ENST00000323959 SERPINA11Q86U17 422 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 POU5F2Q8N7G0 328 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 PSD4Q8NDX1 1056 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 OR52E1Q8NGJ3 308 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 AGR3Q8TD06 166 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 SLC13A3Q8WWT9 602 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 NEIL2Q969S2 332 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 TP53INP1Q96A56 240 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 CITED1Q99966 193 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 SAP130Q9H0E3 1048 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 VCX3BQ9H321 246 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 NTN4Q9HB63 628 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 SERHLQ9NQF3 203 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 DEPPQ9NTK1 212 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 ACSS1Q9NUB1 689 aaPredicted RBP5.97□□□□□ -1.45
CSTF3-201ENST00000323959 EHD3Q9NZN3 535 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 BLOC1S6Q9UL45 172 aa5.97□□□□□ -1.45
CSTF3-201ENST00000323959 NDUFS7O75251 213 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 MYO1DO94832 1006 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 KCNH1O95259 989 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 PLAUP00749 431 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 CHRM5P08912 532 aaPredicted RBP5.96□□□□□ -1.45
CSTF3-201ENST00000323959 TSPAN8P19075 237 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 SLC7A1P30825 629 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 MXRA7P84157 204 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 ZNHIT3Q15649 155 aaPredicted RBP5.96□□□□□ -1.45
CSTF3-201ENST00000323959 CCSMST1Q4G0I0 132 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 OGFRL1Q5TC84 451 aaPredicted RBP5.96□□□□□ -1.45
CSTF3-201ENST00000323959 PAPD4Q6PIY7 484 aaKnown RBP5.96□□□□□ -1.45
CSTF3-201ENST00000323959 RHOUQ7L0Q8 258 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 VN1R5Q7Z5H4 357 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 SLC30A8Q8IWU4 369 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 SLC15A3Q8IY34 581 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 ZCCHC7Q8N3Z6 543 aaKnown RBP5.96□□□□□ -1.45
CSTF3-201ENST00000323959 LILRA3Q8N6C8 439 aaPredicted RBP5.96□□□□□ -1.45
CSTF3-201ENST00000323959 PACRGLQ8N7B6 248 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 ITCHQ96J02 903 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 CDK15Q96Q40 435 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 AIF1LQ9BQI0 150 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 OSBPL10Q9BXB5 764 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 MS4A8Q9BY19 250 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 DPY30Q9C005 99 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 PAIP1Q9H074 479 aaKnown RBP5.96□□□□□ -1.45
CSTF3-201ENST00000323959 MAGIXQ9H6Y5 334 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 CLK4Q9HAZ1 481 aaKnown RBP5.96□□□□□ -1.45
CSTF3-201ENST00000323959 DDX28Q9NUL7 540 aaKnown RBP5.96□□□□□ -1.45
CSTF3-201ENST00000323959 AHSPQ9NZD4 102 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 CCDC167Q9P0B6 97 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 MAGEL2Q9UJ55 1249 aa5.96□□□□□ -1.45
CSTF3-201ENST00000323959 CFAP20Q9Y6A4 193 aaKnown RBP5.96□□□□□ -1.45
CSTF3-201ENST00000323959 ZNF407Q9C0G0 2248 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 ATP6AP2A0A1C7CYW4 349 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 TCRBV5S2A0A599 114 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 FEZF1A0PJY2 475 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 NME4O00746 187 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 ATP6AP2O75787 350 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 PRSS23O95084 383 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 BMP2P12643 396 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 ANPEPP15144 967 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 ACADSP16219 412 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 EPHA1P21709 976 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 CCKARP32238 428 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 VHLP40337 213 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 WNT3P56703 355 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 FGFBP1Q14512 234 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 RPS6KA2Q15349 733 aa5.96□□□□□ -1.46
CSTF3-201ENST00000323959 IMPG1Q17R60 797 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms