RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 ART1P52961 327 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 CTBP2P56545 445 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 EFR3AQ14156 821 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 FXNQ16595 210 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 CCNJQ5T5M9 372 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 PRAMEF17Q5VTA0 474 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 NUP54Q7Z3B4 507 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 ZER1Q7Z7L7 766 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 ARRDC3Q96B67 414 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 NXPE2Q96DL1 559 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 FAM83CQ9BQN1 747 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 SGPP1Q9BX95 441 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 COPS7AQ9UBW8 275 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 SDK1Q7Z5N4 2213 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 GPR89AB7ZAQ6 455 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 LDOC1O95751 146 aaPredicted RBP13.81□□□□□ -0.2
TCOF1-201ENST00000323668 CD160O95971 181 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 PAHP00439 452 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 GPR89BP0CG08 455 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 ZNF888P0CJ79 500 aaPredicted RBP13.81□□□□□ -0.2
TCOF1-201ENST00000323668 CD22P20273 847 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 SHC2P98077 582 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 REEP5Q00765 189 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 DEFA5Q01523 94 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 SNTA1Q13424 505 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 RUNX3Q13761 415 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 PDE7AQ13946 482 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 LRRN1Q6UXK5 716 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 CSNK1A1LQ8N752 337 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 RXFP3Q9NSD7 469 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 GRPRP30550 384 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 HES5Q5TA89 166 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 NXNL2Q5VZ03 156 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 HBMQ6B0K9 141 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 CAMKMTQ7Z624 323 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 CCDC190Q86UF4 302 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 COQ8AQ8NI60 647 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 SERINC2Q96SA4 455 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 INSM2Q96T92 566 aaPredicted RBP13.81□□□□□ -0.2
TCOF1-201ENST00000323668 CENPMQ9NSP4 180 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 ZNF443Q9Y2A4 671 aaPredicted RBP13.81□□□□□ -0.2
TCOF1-201ENST00000323668 LTBP1Q14766 1721 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 POLR2AP24928 1970 aaKnown RBP13.81□□□□□ -0.2
TCOF1-201ENST00000323668 IGLV3-16A0A075B6K0 115 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 ANKRD34BA5PLL1 514 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 HMGN4O00479 90 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 GDI2P50395 445 aaKnown RBP13.81□□□□□ -0.2
TCOF1-201ENST00000323668 MRPL43Q8N983 215 aaKnown RBP13.81□□□□□ -0.2
TCOF1-201ENST00000323668 GATSQ8NAP1 163 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 INO80EQ8NBZ0 244 aaPredicted RBP13.81□□□□□ -0.2
TCOF1-201ENST00000323668 TAPBPLQ9BX59 468 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 ARL6Q9H0F7 186 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 TMEM14AQ9Y6G1 99 aa13.81□□□□□ -0.2
TCOF1-201ENST00000323668 METTL21EPA6NDL7 271 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 RNF13O43567 381 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 CDC123O75794 336 aaPredicted RBP13.8□□□□□ -0.2
TCOF1-201ENST00000323668 GYPBP06028 91 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 GTF2F2P13984 249 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 CEBPBP17676 345 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 RBM34P42696 430 aaKnown RBP13.8□□□□□ -0.2
TCOF1-201ENST00000323668 HACD4Q5VWC8 232 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 OR7G1Q8NGA0 311 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 IL21Q9HBE4 155 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 ASB6Q9NWX5 421 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 DNMT3BQ9UBC3 853 aaKnown RBP13.8□□□□□ -0.2
TCOF1-201ENST00000323668 SCP2D1Q9UJQ7 156 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 SLC35A3Q9Y2D2 325 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 ADH7P40394 386 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 OR5H6Q8NGV6 325 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 COQ10AQ96MF6 247 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 ZDHHC5Q9C0B5 715 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 NANSQ9NR45 359 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 MUTYHQ9UIF7 546 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 NOP16Q9Y3C1 178 aaKnown RBP13.8□□□□□ -0.2
TCOF1-201ENST00000323668 ARID2Q68CP9 1835 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 A0A087WUU8 490 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 NPIPA5A0A0B4J1W7 369 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 NPIPA7E9PJI5 369 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 LGI1O95970 557 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 NPIPA8P0DM63 369 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 SPNP16150 400 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 SLC6A11P48066 632 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 GBX1Q14549 363 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 OR8S1Q8NH09 359 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 C7orf50Q9BRJ6 194 aaKnown RBP13.8□□□□□ -0.2
TCOF1-201ENST00000323668 PRTFDC1Q9NRG1 225 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 NDRG2Q9UN36 371 aaKnown RBP13.8□□□□□ -0.2
TCOF1-201ENST00000323668 C5orf51A6NDU8 294 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 OR2AT4A6NND4 320 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 B4DGG1 531 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 S100A9P06702 114 aaKnown RBP13.8□□□□□ -0.2
TCOF1-201ENST00000323668 HTR1FP30939 366 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 TRIM23P36406 574 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 METTL11BQ5VVY1 283 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 MBOAT2Q6ZWT7 520 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 C10orf111Q8N326 155 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 OR52N1Q8NH53 320 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 TANKQ92844 425 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 ALG14Q96F25 216 aa13.8□□□□□ -0.2
TCOF1-201ENST00000323668 OR2M2Q96R28 347 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms