RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 MMABQ96EY8 250 aaPredicted RBP14.31□□□□□ -0.12
VARS2-201ENST00000321897 C5orf34Q96MH7 638 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 TMEM185BQ9H7F4 350 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 ATP13A2Q9NQ11 1180 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 ACSL5Q9ULC5 683 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 OR51B4Q9Y5P0 310 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 GRXCR2A6NFK2 248 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 ZNF670-ZNF695F2Z2N8 137 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 CLDN4O14493 209 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 GAPDHSO14556 408 aaPredicted RBP14.31□□□□□ -0.12
VARS2-201ENST00000321897 ACVR2AP27037 513 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 GJA4P35212 333 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 BCL2A1Q16548 175 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 FAM111BQ6SJ93 734 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 ASPGQ86U10 573 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 ANKK1Q8NFD2 765 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 TTLQ8NG68 377 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 OR56A1Q8NGH5 318 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 UCN3Q969E3 161 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 CPNE2Q96FN4 548 aaPredicted RBP14.31□□□□□ -0.12
VARS2-201ENST00000321897 BRF2Q9HAW0 419 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 CACNG2Q9Y698 323 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 UNC13CQ8NB66 2214 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 OR2W5A6NFC9 320 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 ARPC1BO15143 372 aaKnown RBP14.31□□□□□ -0.12
VARS2-201ENST00000321897 SLCO2B1O94956 709 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 SIX6O95475 246 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 ADAP00813 363 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 PRR35P0CG20 571 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 EDNRAP25101 427 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 ITGB7P26010 798 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 PITPNAQ00169 270 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 SCRN3Q0VDG4 424 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 LINC00299Q6ZSB3 139 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 SHISA6Q6ZSJ9 500 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 JAZF1Q86VZ6 243 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 ZC3H10Q96K80 434 aaKnown RBP14.31□□□□□ -0.12
VARS2-201ENST00000321897 PIGUQ9H490 435 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 TCF7L1Q9HCS4 588 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 MED31Q9Y3C7 131 aa14.31□□□□□ -0.12
VARS2-201ENST00000321897 A0A0G2JMP0 313 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 A0A0X1KG70 313 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 TRIM3O75382 744 aaPredicted RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 ZNF250P15622 560 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 RAB3BP20337 219 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 RPS21P63220 83 aaKnown RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 TAF13Q15543 124 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 SLX4IPQ5VYV7 408 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 GDPGP1Q6ZNW5 385 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 C17orf107Q6ZR85 190 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 OR4M2Q8NGB6 313 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 OR2L2Q8NH16 312 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 WDR20Q8TBZ3 569 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 TSEN15Q8WW01 171 aaKnown RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 SPRYD4Q8WW59 207 aaPredicted RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 ALG14Q96F25 216 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 MRPL48Q96GC5 212 aaKnown RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 MSLNLQ96KJ4 702 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 GPR174Q9BXC1 333 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 WSB2Q9NYS7 404 aaPredicted RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 NPAP1Q9NZP6 1156 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 SLC7A7Q9UM01 511 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 AK6Q9Y3D8 172 aaKnown RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 YY2O15391 372 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 FLRT2O43155 660 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 TMPRSS11DO60235 418 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 LCMT2O60294 686 aaKnown RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 EN2P19622 333 aaPredicted RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 CREB3L2Q70SY1 520 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 POGLUT1Q8NBL1 392 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 ZNF784Q8NCA9 323 aaPredicted RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 CHST4Q8NCG5 386 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 TM9SF4Q92544 642 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 C7orf34Q96L11 122 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 PLEKHA6Q9Y2H5 1048 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 EXOSC1Q9Y3B2 195 aaKnown RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 ANXA2P2A6NMY6 339 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 GFYI3L273 518 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 MRPS14O60783 128 aaKnown RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 ANXA2P07355 339 aaKnown RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 VAMP1P23763 118 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 SLC6A12P48065 614 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 TAGLNQ01995 201 aaKnown RBP14.3□□□□□ -0.12
VARS2-201ENST00000321897 KIAA0040Q15053 153 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 BEX5Q5H9J7 111 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 C3P1Q6ZMU1 363 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 TTLL10Q6ZVT0 673 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 CCL4L1Q8NHW4 92 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 FANK1Q8TC84 345 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 SLC7A13Q8TCU3 470 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 ADAMTS19Q8TE59 1207 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 CASTOR1Q8WTX7 329 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 C1QTNF3Q9BXJ4 246 aa14.3□□□□□ -0.12
VARS2-201ENST00000321897 TRAV27A0A087WT01 109 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 A0A1W2PPL8 197 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 TOR1AO14656 332 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 EMC8O43402 210 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 SCG5P05408 212 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 GIPRP48546 466 aa14.29□□□□□ -0.12
VARS2-201ENST00000321897 HES5Q5TA89 166 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms