RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 A0A1W2PR77 199 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 CDC42EP2O14613 210 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 GNB5O14775 395 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 SLC2A10O95528 541 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 CBX7O95931 251 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 DMWDQ09019 674 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 ST3GAL3Q11203 375 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 LARS2Q15031 903 aaKnown RBP11.53□□□□□ -0.56
RNF4-201ENST00000314289 TRAM2Q15035 370 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 C12orf73Q69YU5 71 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 PLAG1Q6DJT9 500 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 TSSK4Q6SA08 328 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 WDR88Q6ZMY6 472 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 IL17RDQ8NFM7 739 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 KBTBD8Q8NFY9 601 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 SAP130Q9H0E3 1048 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 ATP13A2Q9NQ11 1180 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 PRDM6Q9NQX0 595 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 ALPK2Q86TB3 2170 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 FAM221BA6H8Z2 402 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 LOC110117498-PIK3R3F6TDL0 507 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 CTDSP2O14595 271 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 RGS5O15539 181 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 ALAS2P22557 587 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 HTR2AP28223 471 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 PRKAR1BP31321 381 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 UGT2B10P36537 528 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 CAPZBP47756 277 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 ZNF267Q14586 743 aaPredicted RBP11.53□□□□□ -0.56
RNF4-201ENST00000314289 SAMD14Q8IZD0 417 aaPredicted RBP11.53□□□□□ -0.56
RNF4-201ENST00000314289 PFN4Q8NHR9 129 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 HLA-CQ95604 372 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 RBM18Q96H35 190 aaKnown RBP11.53□□□□□ -0.56
RNF4-201ENST00000314289 SPACA7Q96KW9 195 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 MGLLQ99685 303 aa11.53□□□□□ -0.56
RNF4-201ENST00000314289 CHURC1-FNTBB4DL54 471 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 RGS13O14921 159 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 TFECO14948 347 aaPredicted RBP11.52□□□□□ -0.56
RNF4-201ENST00000314289 STX11O75558 287 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 AZGP1P25311 298 aaKnown RBP11.52□□□□□ -0.56
RNF4-201ENST00000314289 MLLT3P42568 568 aaPredicted RBP11.52□□□□□ -0.56
RNF4-201ENST00000314289 RGS6P49758 472 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 ZNF136P52737 540 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 RAB38P57729 211 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 FOXL2P58012 376 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 NDUFAF6Q330K2 333 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 SYT14P1Q58G82 188 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 HSDL2Q6YN16 418 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 SLC46A3Q7Z3Q1 461 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 OR8J1Q8NGP2 316 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 FCGR1BQ92637 280 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 TP53INP1Q96A56 240 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 PTCHD1Q96NR3 888 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 CACYBPQ9HB71 228 aaKnown RBP11.52□□□□□ -0.56
RNF4-201ENST00000314289 C20orf141Q9NUB4 165 aa11.52□□□□□ -0.56
RNF4-201ENST00000314289 PI4KAP42356 2102 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 FREM2Q5SZK8 3169 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 FAM183AA6NL82 134 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 A8MUA0 341 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 SYT5O00445 386 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 ADAM11O75078 769 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 OMPP47874 163 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 OR1D5P58170 312 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 EEF1A1P68104 462 aaKnown RBP11.52□□□□□ -0.57
RNF4-201ENST00000314289 PRKCDQ05655 676 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 ZFP69Q49AA0 526 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.52□□□□□ -0.57
RNF4-201ENST00000314289 PDZK1Q5T2W1 519 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 SMARCD3Q6STE5 483 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 NRARPQ7Z6K4 114 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 PRSS58Q8IYP2 241 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 TEX47Q8TBZ9 253 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.52□□□□□ -0.57
RNF4-201ENST00000314289 RIT1Q92963 219 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 NEDD4LQ96PU5 975 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 TTYH2Q9BSA4 534 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 DPH1Q9BZG8 443 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 OR2B2Q9GZK3 357 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 ZNF350Q9GZX5 532 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 SLC25A19Q9HC21 320 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 EXOSC4Q9NPD3 245 aaKnown RBP11.52□□□□□ -0.57
RNF4-201ENST00000314289 NTMQ9P121 344 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 NDOR1Q9UHB4 597 aa11.52□□□□□ -0.57
RNF4-201ENST00000314289 EFCAB10A6NFE3 127 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 NOTOA8MTQ0 251 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 PLOD3O60568 738 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 IFNA16P05015 189 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 POU3F3P20264 500 aaPredicted RBP11.51□□□□□ -0.57
RNF4-201ENST00000314289 SLC15A1P46059 708 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 OR1D4P47884 311 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 PSG6Q00889 435 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 PLAURQ03405 335 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 MFSD4BQ5TF39 518 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 GKN2Q86XP6 184 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 CYP4Z2PQ8N1L4 340 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 ZNF619Q8N2I2 560 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 CDRT4Q8N9R6 151 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 OR6F1Q8NGZ6 308 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 DEPDC7Q96QD5 511 aa11.51□□□□□ -0.57
RNF4-201ENST00000314289 LMF1Q96S06 567 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms