RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ZNF160Q9HCG1 818 aa11.93□□□□□ -0.5
USP38-201ENST00000307017 SC5DO75845 299 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 RAB3DO95716 219 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 CHRM4P08173 479 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 HTR7P34969 479 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 KCNJ8Q15842 424 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 ZNF805Q5CZA5 627 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 PRAMEF8Q5VWM4 474 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 PRAMEF7Q5VXH5 474 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 LIPJQ5W064 366 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 TMPRSS7Q7RTY8 843 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 SAMD14Q8IZD0 417 aaPredicted RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 TCTEX1D2Q8WW35 142 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 ZNF382Q96SR6 550 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 MEIOCA2RUB1 952 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 IL1AP01583 271 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 RNH1P13489 461 aaKnown RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 UGT2B7P16662 529 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 BCL2A1Q16548 175 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 AARDQ4LEZ3 155 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 TMEM25Q86YD3 366 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 PBDC1Q9BVG4 233 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 WSB2Q9NYS7 404 aaPredicted RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 B3GNT3Q9Y2A9 372 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 GAAP10253 952 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 HOXB6P17509 224 aaKnown RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 CCR6P51684 374 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 HNRNPFP52597 415 aaKnown RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 RELAQ04206 551 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 TLE3Q04726 772 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 TMEM35AQ53FP2 167 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 ACBD7Q8N6N7 88 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 ATOH1Q92858 354 aaPredicted RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 C11orf49Q9H6J7 331 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 RNF167Q9H6Y7 350 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 OLAHQ9NV23 265 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 TXNL4BQ9NX01 149 aaKnown RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 TMEM9Q9P0T7 183 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 FETUBQ9UGM5 382 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 H0YAE9 185 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 B4GALT3O60512 393 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 TGM6O95932 706 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 SNRPBP14678 240 aaKnown RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 OR8J3Q8NGG0 315 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 DPF1Q92782 380 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 INTS14Q96SY0 518 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 DEFB126Q9BYW3 111 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 ZC3H12DA2A288 527 aaKnown RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 ACOD1A6NK06 481 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 ARSBP15848 533 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 GM2AP17900 193 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 CTBP2P56545 445 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 TAS2R38P59533 333 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 IL13RA1P78552 427 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 ZNF704Q6ZNC4 412 aaPredicted RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 COMMD6Q7Z4G1 85 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 CHPT1Q8WUD6 406 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 LINC01599Q8WXQ3 324 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 ACDQ96AP0 544 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 MFFQ9GZY8 342 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 SPO11Q9Y5K1 396 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 DUOX1Q9NRD9 1551 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 CCSO14618 274 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 HCCSP53701 268 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 EEF1A1P68104 462 aaKnown RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 MALLQ13021 153 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 GPR50Q13585 617 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 RGNQ15493 299 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 ZNF750Q32MQ0 723 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 AGAP7PQ5VUJ5 663 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 AGAP6Q5VW22 663 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 ZNF420Q8TAQ5 688 aaPredicted RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 AGAP4Q96P64 663 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 URM1Q9BTM9 101 aaKnown RBP11.92□□□□□ -0.5
USP38-201ENST00000307017 TMEM181Q9P2C4 612 aa11.92□□□□□ -0.5
USP38-201ENST00000307017 ADGRB2O60241 1585 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 IFNA1P01562 189 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 SHEQ5VZ18 495 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 ATG9BQ674R7 924 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 TMIEQ8NEW7 156 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 LINC00597Q9H2U6 94 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 OR51J1Q9H342 316 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 METTL17Q9H7H0 456 aaPredicted RBP11.91□□□□□ -0.5
USP38-201ENST00000307017 NTN4Q9HB63 628 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 SPATA6Q9NWH7 488 aaPredicted RBP11.91□□□□□ -0.5
USP38-201ENST00000307017 ANKRD26Q9UPS8 1709 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 ACTL6BO94805 426 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 CBX7O95931 251 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 CD68P34810 354 aaPredicted RBP11.91□□□□□ -0.5
USP38-201ENST00000307017 ADARB1P78563 741 aaKnown RBP11.91□□□□□ -0.5
USP38-201ENST00000307017 TNK1Q13470 666 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 TRAM1L1Q8N609 369 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 CNEP1R1Q8N9A8 125 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 OR4C15Q8NGM1 316 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 FUBP1Q96AE4 644 aaKnown RBP11.91□□□□□ -0.5
USP38-201ENST00000307017 G6PC3Q9BUM1 346 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 VEGFCP49767 419 aa11.91□□□□□ -0.5
USP38-201ENST00000307017 MOB3CQ70IA8 216 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms