RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ABHD4Q8TB40 342 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 RADILQ96JH8 1075 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 DPYSL5Q9BPU6 564 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 DLL4Q9NR61 685 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 HPF1Q9NWY4 346 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 TRBV2A0A0J9YWF9 115 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 ABHD14A-ACY1A0A1B0GW23 586 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 FOXE1O00358 373 aaPredicted RBP12.21□□□□□ -0.45
TRIM35-201ENST00000305364 NDUFS4O43181 175 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 ZNF3P17036 446 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 MVDP53602 400 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 TECPR1Q7Z6L1 1165 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 TMED4Q7Z7H5 227 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 TRAM1L1Q8N609 369 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 OR56A3Q8NH54 315 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 TFGQ92734 400 aaPredicted RBP12.21□□□□□ -0.45
TRIM35-201ENST00000305364 CHST8Q9H2A9 424 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 LIN7BQ9HAP6 207 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 CXXC1Q9P0U4 656 aaPredicted RBP12.21□□□□□ -0.45
TRIM35-201ENST00000305364 KLHL9Q9P2J3 617 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 KANTRA0A1W2PQU2 76 aa12.21□□□□□ -0.46
TRIM35-201ENST00000305364 SLC22A31A6NKX4 558 aa12.21□□□□□ -0.46
TRIM35-201ENST00000305364 RPP14O95059 124 aaKnown RBP12.21□□□□□ -0.46
TRIM35-201ENST00000305364 RCBTB2O95199 551 aa12.21□□□□□ -0.46
TRIM35-201ENST00000305364 AGFG1P52594 562 aaKnown RBP12.21□□□□□ -0.46
TRIM35-201ENST00000305364 PRMT2P55345 433 aa12.21□□□□□ -0.46
TRIM35-201ENST00000305364 STXBP1P61764 594 aaKnown RBP12.21□□□□□ -0.46
TRIM35-201ENST00000305364 RPTNQ6XPR3 784 aa12.21□□□□□ -0.46
TRIM35-201ENST00000305364 FAM83HQ6ZRV2 1179 aaPredicted RBP12.21□□□□□ -0.46
TRIM35-201ENST00000305364 SPAG16Q8N0X2 631 aa12.21□□□□□ -0.46
TRIM35-201ENST00000305364 GOT1L1Q8NHS2 421 aaPredicted RBP12.21□□□□□ -0.46
TRIM35-201ENST00000305364 GRHL3Q8TE85 626 aa12.21□□□□□ -0.46
TRIM35-201ENST00000305364 FERD3LQ96RJ6 166 aa12.21□□□□□ -0.46
TRIM35-201ENST00000305364 C7orf50Q9BRJ6 194 aaKnown RBP12.21□□□□□ -0.46
TRIM35-201ENST00000305364 ZNF471Q9BX82 626 aaPredicted RBP12.21□□□□□ -0.46
TRIM35-201ENST00000305364 MRPS23Q9Y3D9 190 aaKnown RBP12.21□□□□□ -0.46
TRIM35-201ENST00000305364 PIP5K1CO60331 668 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 SLCO2B1O94956 709 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 CXCL14O95715 111 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 CFDP00746 253 aaPredicted RBP12.2□□□□□ -0.46
TRIM35-201ENST00000305364 S100A6P06703 90 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 GALTP07902 379 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 SLC35G4P0C7Q5 338 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 MPIP34949 423 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 RAP2BP61225 183 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 KIAA1211LQ6NV74 962 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 NLRC3Q7RTR2 1065 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 TPRA1Q86W33 373 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 ZNF461Q8TAF7 563 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 OVCA2Q8WZ82 227 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 SORCS2Q96PQ0 1159 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 TMEM185BQ9H7F4 350 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 FBXL2Q9UKC9 423 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 A4GNTQ9UNA3 340 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 BACE2Q9Y5Z0 518 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 TMEM189-UBE2V1I3L0A0 370 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 C1orf105O95561 183 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 ZDHHC11BP0C7U3 371 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 GDI2P50395 445 aaKnown RBP12.2□□□□□ -0.46
TRIM35-201ENST00000305364 C18orf63Q68DL7 685 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 AUTS2Q8WXX7 1259 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 GHSRQ92847 366 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 GCDHQ92947 438 aaPredicted RBP12.2□□□□□ -0.46
TRIM35-201ENST00000305364 MFFQ9GZY8 342 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 HINT3Q9NQE9 182 aaKnown RBP12.2□□□□□ -0.46
TRIM35-201ENST00000305364 WDR45Q9Y484 360 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.2□□□□□ -0.46
TRIM35-201ENST00000305364 UNC119BA6NIH7 251 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 ZNF593O00488 134 aaPredicted RBP12.2□□□□□ -0.46
TRIM35-201ENST00000305364 PCDH8O95206 1070 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 ENPP1P22413 925 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 S100A11P31949 105 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 SOX2P48431 317 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 ERVK-21P61565 698 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 MFSD13AQ14CX5 517 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 TUSC1Q2TAM9 212 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 SLC25A35Q3KQZ1 300 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 FAM220AQ7Z4H9 259 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 TMEM17Q86X19 198 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 OR8S1Q8NH09 359 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 ACOT11Q8WXI4 607 aaPredicted RBP12.2□□□□□ -0.46
TRIM35-201ENST00000305364 ZNF689Q96CS4 500 aaPredicted RBP12.2□□□□□ -0.46
TRIM35-201ENST00000305364 SLC41A3Q96GZ6 507 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 DPH7Q9BTV6 452 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 SLC25A18Q9H1K4 315 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 EXO5Q9H790 373 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 SCML1Q9UN30 329 aa12.2□□□□□ -0.46
TRIM35-201ENST00000305364 HTR1FP30939 366 aa12.19□□□□□ -0.46
TRIM35-201ENST00000305364 MNDAP41218 407 aa12.19□□□□□ -0.46
TRIM35-201ENST00000305364 MC2RQ01718 297 aa12.19□□□□□ -0.46
TRIM35-201ENST00000305364 CAMK1Q14012 370 aa12.19□□□□□ -0.46
TRIM35-201ENST00000305364 DOC2BQ14184 412 aa12.19□□□□□ -0.46
TRIM35-201ENST00000305364 FAM69AQ5T7M9 428 aa12.19□□□□□ -0.46
TRIM35-201ENST00000305364 ZNF770Q6IQ21 691 aaPredicted RBP12.19□□□□□ -0.46
TRIM35-201ENST00000305364 C1orf94Q6P1W5 598 aa12.19□□□□□ -0.46
TRIM35-201ENST00000305364 RNF44Q7L0R7 432 aa12.19□□□□□ -0.46
TRIM35-201ENST00000305364 KRT77Q7Z794 578 aa12.19□□□□□ -0.46
TRIM35-201ENST00000305364 ZDHHC1Q8WTX9 485 aa12.19□□□□□ -0.46
TRIM35-201ENST00000305364 CNOT9Q92600 299 aaKnown RBP12.19□□□□□ -0.46
TRIM35-201ENST00000305364 MCOLN1Q9GZU1 580 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms