RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SSX1Q16384 188 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 ZXDCQ2QGD7 858 aaPredicted RBP12.46□□□□□ -0.42
CASC4-201ENST00000299957 CCDC58Q4VC31 144 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 CPXM2Q8N436 756 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 TMEM163Q8TC26 289 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 BADQ92934 168 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 EFHD2Q96C19 240 aaPredicted RBP12.46□□□□□ -0.42
CASC4-201ENST00000299957 PDCD1LG2Q9BQ51 273 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 RETREG1Q9H6L5 497 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 SLAMF7Q9NQ25 335 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 SPHK1Q9NYA1 384 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 STOML2Q9UJZ1 356 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 PLEKHA6Q9Y2H5 1048 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 POLR1CO15160 346 aaPredicted RBP12.45□□□□□ -0.42
CASC4-201ENST00000299957 RGS9O75916 674 aaPredicted RBP12.45□□□□□ -0.42
CASC4-201ENST00000299957 CSRP3P50461 194 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 GMFBP60983 142 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 PRDX1Q06830 199 aaKnown RBP12.45□□□□□ -0.42
CASC4-201ENST00000299957 CRMP1Q14194 572 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 TECPR1Q7Z6L1 1165 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 MMABQ96EY8 250 aaPredicted RBP12.45□□□□□ -0.42
CASC4-201ENST00000299957 ALG14Q96F25 216 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 GPER1Q99527 375 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 ZDHHC5Q9C0B5 715 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 SEMA4GQ9NTN9 838 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 ACSL5Q9ULC5 683 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 CDH10Q9Y6N8 788 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 LRRC37AA6NMS7 1700 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 A0A1B0GW55 424 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 H0Y8X5 98 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 APOC3P02656 99 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 OPN1LWP04000 364 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 ALDOBP05062 364 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 DUX4L2P0CJ85 424 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 DUX4L3P0CJ86 424 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 DUX4L4P0CJ87 422 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 DUX4L5P0CJ88 424 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 DUX4L6P0CJ89 424 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 DUX4L7P0CJ90 424 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 CPMP14384 443 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 P2RY2P41231 377 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 PXNP49023 591 aaPredicted RBP12.45□□□□□ -0.42
CASC4-201ENST00000299957 PSPHP78330 225 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 FAM26DQ5JW98 314 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 TMEM215Q68D42 235 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 TMEM64Q6YI46 380 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 IKBIPQ70UQ0 350 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 C12orf40Q86WS4 652 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 ARMC10Q8N2F6 343 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 TMEM239Q8WW34 195 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 ELMOD3Q96FG2 381 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 CTRCQ99895 268 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 KATNB1Q9BVA0 655 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 MS4A8Q9BY19 250 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 HOXD1Q9GZZ0 328 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 GPN1Q9HCN4 374 aaPredicted RBP12.45□□□□□ -0.42
CASC4-201ENST00000299957 DUX4Q9UBX2 424 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 PFDN2Q9UHV9 154 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 BAIAP2Q9UQB8 552 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 TRIOBPQ9H2D6 2365 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 C13orf42A0A1B0GVH6 325 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 ZAR1LA6NP61 321 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 CLUP10909 449 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 ACP2P11117 423 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 ARSBP15848 533 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 HSD17B2P37059 387 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 CD79BP40259 229 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 MAGEA2P43356 314 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 ADAM8P78325 824 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 PATE1Q8WXA2 126 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 TRIM43Q96BQ3 446 aaPredicted RBP12.45□□□□□ -0.42
CASC4-201ENST00000299957 BPIFA2Q96DR5 249 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 CHFRQ96EP1 664 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 SLC17A9Q9BYT1 436 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 ARPC1BO15143 372 aaKnown RBP12.45□□□□□ -0.42
CASC4-201ENST00000299957 COQ9O75208 318 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 RDH16O75452 317 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 PLATP00750 562 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 IFNA6P05013 189 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 CHRM4P08173 479 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 CSF3P09919 207 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 UCHL1P09936 223 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 CD6P30203 668 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 PITPNBP48739 271 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 DNASE1L1P49184 302 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 PGGHGQ32M88 737 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 PUS10Q3MIT2 529 aaKnown RBP12.45□□□□□ -0.42
CASC4-201ENST00000299957 MRPL2Q5T653 305 aaKnown RBP12.45□□□□□ -0.42
CASC4-201ENST00000299957 OR5M10Q6IEU7 315 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 FAAP20Q6NZ36 180 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 KCTD9Q7L273 389 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 ACOT11Q8WXI4 607 aaPredicted RBP12.45□□□□□ -0.42
CASC4-201ENST00000299957 SMPDL3BQ92485 455 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 NEURL3Q96EH8 262 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 ACTRT3Q9BYD9 372 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 MKRN2Q9H000 416 aaKnown RBP12.45□□□□□ -0.42
CASC4-201ENST00000299957 EXO5Q9H790 373 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 SLC28A3Q9HAS3 691 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 RCE1Q9Y256 329 aa12.45□□□□□ -0.42
CASC4-201ENST00000299957 CHST2Q9Y4C5 530 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms