RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 GDE1Q9NZC3 331 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 H2AFY2Q9P0M6 372 aaPredicted RBP12.67□□□□□ -0.38
BCCIP-202ENST00000299130 NTMQ9P121 344 aa12.67□□□□□ -0.38
BCCIP-202ENST00000299130 FAM172BPA6NC97 362 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 UNC119BA6NIH7 251 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 DUXAA6NLW8 204 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 LDB3O75112 727 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 REM1O75628 298 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 LYPD3O95274 346 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 FAM157BP0CG42 384 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 PSKH1P11801 424 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 S100A1P23297 94 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 GDI1P31150 447 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 KIR2DL1P43626 348 aaPredicted RBP12.66□□□□□ -0.38
BCCIP-202ENST00000299130 MAP2K3P46734 347 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 FAM27D1Q5T7N8 215 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 THSD4Q6ZMP0 1018 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 TMEM52Q8NDY8 209 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 TSACCQ96A04 125 aaPredicted RBP12.66□□□□□ -0.38
BCCIP-202ENST00000299130 OR2M4Q96R27 311 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 OR2A5Q96R48 311 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 TMEM246Q9BRR3 403 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 IGFLR1Q9H665 355 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 SFXN1Q9H9B4 322 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 ADAP2Q9NPF8 381 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 MED17Q9NVC6 651 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 COLEC10Q9Y6Z7 277 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 SYNDIG1LA6NDD5 238 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 E9PI62 339 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 GTPBP1O00178 669 aaKnown RBP12.66□□□□□ -0.38
BCCIP-202ENST00000299130 RNF13O43567 381 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 HYAL3O43820 417 aaPredicted RBP12.66□□□□□ -0.38
BCCIP-202ENST00000299130 HLA-DQB1P01920 261 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 CHRNB1P11230 501 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 RPS15AP62244 130 aaKnown RBP12.66□□□□□ -0.38
BCCIP-202ENST00000299130 PLAURQ03405 335 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 QPRTQ15274 297 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 NDUFA5Q16718 116 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 NIPAL3Q6P499 406 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 PARM1Q6UWI2 310 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 ENPP7Q6UWV6 458 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 IL20RBQ6UXL0 311 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 YAF2Q8IY57 180 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 NT5CQ8TCD5 201 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 PHOSPHO2Q8TCD6 241 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 KISS1RQ969F8 398 aaPredicted RBP12.66□□□□□ -0.38
BCCIP-202ENST00000299130 SCARF2Q96GP6 870 aaPredicted RBP12.66□□□□□ -0.38
BCCIP-202ENST00000299130 SRMSQ9H3Y6 488 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 SIDT1Q9NXL6 827 aaKnown RBP12.66□□□□□ -0.38
BCCIP-202ENST00000299130 OR6C2Q9NZP2 312 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 NLKQ9UBE8 527 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 PRKAG2Q9UGJ0 569 aa12.66□□□□□ -0.38
BCCIP-202ENST00000299130 TRANK1O15050 2925 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 A0A1B0GVC2 190 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 GSAPA4D1B5 854 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 A6NIN4 97 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 BHLHE40O14503 412 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 TRAPPC2P0DI81 140 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 TRAPPC2BP0DI82 140 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 SMIM10L1P0DMW3 83 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 CLUP10909 449 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 IFI30P13284 250 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 ELK1P19419 428 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 COL9A1P20849 921 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 RGS1Q08116 209 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 DUSP8Q13202 625 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 OR1Q1Q15612 314 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 TATDN3Q17R31 274 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 MRPL2Q5T653 305 aaKnown RBP12.65□□□□□ -0.38
BCCIP-202ENST00000299130 FHL5Q5TD97 284 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 TRIQKQ629K1 86 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 FCRL6Q6DN72 434 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 NOXA1Q86UR1 476 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 ASCC1Q8N9N2 400 aaKnown RBP12.65□□□□□ -0.38
BCCIP-202ENST00000299130 C19orf18Q8NEA5 215 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 FANK1Q8TC84 345 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 FGF14Q92915 247 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 PTP4A1Q93096 173 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 UPRTQ96BW1 309 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 TM4SF19Q96DZ7 209 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 SMIM10Q96HG1 83 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 TMEM43Q9BTV4 400 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 ALG8Q9BVK2 526 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 TEX12Q9BXU0 123 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 ASB6Q9NWX5 421 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 CLDND1Q9NY35 253 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 PTGFRNQ9P2B2 879 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 DAPP1Q9UN19 280 aa12.65□□□□□ -0.38
BCCIP-202ENST00000299130 CHST10O43529 356 aa12.65□□□□□ -0.39
BCCIP-202ENST00000299130 HCN1O60741 890 aa12.65□□□□□ -0.39
BCCIP-202ENST00000299130 HMGN1P05114 100 aa12.65□□□□□ -0.39
BCCIP-202ENST00000299130 MRPL3P09001 348 aaKnown RBP12.65□□□□□ -0.39
BCCIP-202ENST00000299130 CPMP14384 443 aa12.65□□□□□ -0.39
BCCIP-202ENST00000299130 EXOSC7Q15024 291 aaKnown RBP12.65□□□□□ -0.39
BCCIP-202ENST00000299130 KLHL12Q53G59 568 aa12.65□□□□□ -0.39
BCCIP-202ENST00000299130 PRRT3Q5FWE3 981 aa12.65□□□□□ -0.39
BCCIP-202ENST00000299130 TMEM196Q5HYL7 178 aa12.65□□□□□ -0.39
BCCIP-202ENST00000299130 IDNKQ5T6J7 187 aa12.65□□□□□ -0.39
BCCIP-202ENST00000299130 FIGNL1Q6PIW4 674 aa12.65□□□□□ -0.39
BCCIP-202ENST00000299130 TRILQ7L0X0 811 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms