RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 C5AR2Q9P296 337 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 GMPR2Q9P2T1 348 aaKnown RBP10.39□□□□□ -0.75
PBRM1-201ENST00000296302 USP22Q9UPT9 525 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 KDM3BQ7LBC6 1761 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 CDHR4A6H8M9 788 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 CPNE6O95741 557 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 GAAP10253 952 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 UBE2NLQ5JXB2 153 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 OR8J2Q8NGG1 315 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 SLC7A6Q92536 515 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 FOXRED1Q96CU9 486 aaPredicted RBP10.39□□□□□ -0.75
PBRM1-201ENST00000296302 TMEM121BQ9BXQ6 578 aaPredicted RBP10.39□□□□□ -0.75
PBRM1-201ENST00000296302 SLC25A18Q9H1K4 315 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 OR52D1Q9H346 318 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 WASH6PQ9NQA3 447 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 C2orf42Q9NWW7 574 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 NDRG2Q9UN36 371 aaKnown RBP10.39□□□□□ -0.75
PBRM1-201ENST00000296302 TIAM2Q8IVF5 1701 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 ANKRD33BA6NCL7 494 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 TYRP1P17643 537 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 NFYAP23511 347 aaPredicted RBP10.39□□□□□ -0.75
PBRM1-201ENST00000296302 PTBP1P26599 531 aaKnown RBP eCLIP10.39□□□□□ -0.75
PBRM1-201ENST00000296302 CASRP41180 1078 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 IDH3GP51553 393 aaPredicted RBP10.39□□□□□ -0.75
PBRM1-201ENST00000296302 TRA2BP62995 288 aaKnown RBP10.39□□□□□ -0.75
PBRM1-201ENST00000296302 IL13RA1P78552 427 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 SIM1P81133 766 aaPredicted RBP10.39□□□□□ -0.75
PBRM1-201ENST00000296302 FPGSQ05932 587 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 LYPD4Q6UWN0 246 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 Q6ZPB1 254 aaPredicted RBP10.39□□□□□ -0.75
PBRM1-201ENST00000296302 GKN2Q86XP6 184 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 SERPINA12Q8IW75 414 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 ARRDC2Q8TBH0 407 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 MYLIPQ8WY64 445 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 EGLN2Q96KS0 407 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 BACE2Q9Y5Z0 518 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 RNF215Q9Y6U7 377 aa10.39□□□□□ -0.75
PBRM1-201ENST00000296302 TSTD3H0UI37 97 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 HMGN2P05204 90 aaKnown RBP10.38□□□□□ -0.75
PBRM1-201ENST00000296302 C6P13671 934 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 OR2G6Q5TZ20 316 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 TSSK4Q6SA08 328 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 APOOLQ6UXV4 268 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 PAQR8Q8TEZ7 354 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 HMGB4Q8WW32 186 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 DAZLQ92904 295 aaKnown RBP10.38□□□□□ -0.75
PBRM1-201ENST00000296302 NEIL2Q969S2 332 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 TEPSINQ96N21 525 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 WDR77Q9BQA1 342 aaPredicted RBP10.38□□□□□ -0.75
PBRM1-201ENST00000296302 FAM86C1Q9NVL1 165 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 DIMT1Q9UNQ2 313 aaKnown RBP10.38□□□□□ -0.75
PBRM1-201ENST00000296302 COPS3Q9UNS2 423 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 PNMTP11086 282 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 CHATP28329 748 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 MTNR1BP49286 362 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 RAB5CP51148 216 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 TSPAN31Q12999 210 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 FUNDC1Q8IVP5 155 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 OR4N5Q8IXE1 308 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 CREB3L4Q8TEY5 395 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 WDR92Q96MX6 357 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 ZNF416Q9BWM5 594 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 LSM5Q9Y4Y9 91 aaKnown RBP10.38□□□□□ -0.75
PBRM1-201ENST00000296302 INSL6Q9Y581 213 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 IER3IP1Q9Y5U9 82 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 A0A1B0GV50 99 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 SYT7O43581 403 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 SCO2O43819 266 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 ZNF254O75437 659 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 IQCF3P0C7M6 154 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 OC90Q02509 493 aaPredicted RBP10.38□□□□□ -0.75
PBRM1-201ENST00000296302 ILKQ13418 452 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 RBMS2Q15434 407 aaKnown RBP10.38□□□□□ -0.75
PBRM1-201ENST00000296302 NNATQ16517 81 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 PKDCCQ504Y2 493 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 GLB1L2Q8IW92 636 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 C3orf49Q96BT1 292 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 BPIFA2Q96DR5 249 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 DUS3LQ96G46 650 aaKnown RBP10.38□□□□□ -0.75
PBRM1-201ENST00000296302 ZNF419Q96HQ0 510 aaPredicted RBP10.38□□□□□ -0.75
PBRM1-201ENST00000296302 SAMD11Q96NU1 681 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 ZNF442Q9H7R0 627 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 PRMT8Q9NR22 394 aaPredicted RBP10.38□□□□□ -0.75
PBRM1-201ENST00000296302 FBXO8Q9NRD0 319 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 ICKQ9UPZ9 632 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 ATG4BQ9Y4P1 393 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 FAM230AA0A1W2PPH8 454 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 NPIPB15A6NHN6 443 aaPredicted RBP10.38□□□□□ -0.75
PBRM1-201ENST00000296302 A6NIN4 97 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 AGPAT2O15120 278 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 GPR39O43194 453 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 UBL3O95164 117 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 SLC34A2O95436 690 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 THEGLP0DJG4 465 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 HOXB2P14652 356 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 ETV1P50549 477 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 GBX1Q14549 363 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 CTSL3PQ5NE16 218 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 TRNP1Q6NT89 227 aa10.38□□□□□ -0.75
PBRM1-201ENST00000296302 OR4F15Q8NGB8 312 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms